BLASTX nr result

ID: Angelica22_contig00030562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030562
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|NP_568185.1| Mitochondrial transcription termination factor ...   115   4e-24
ref|XP_002871294.1| mitochondrial transcription termination fact...   113   2e-23
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258...   112   3e-23

>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/180 (35%), Positives = 108/180 (60%), Gaps = 1/180 (0%)
 Frame = -1

Query: 544 SSYRITKNVSSKLTSIKALFENYGFTDAQVSKLFKKHPSIVSLNL-GIVKPKLDYLHSYG 368
           SS ++      +  ++ AL ++ GFT  Q+S L KK PS++  +    + PKL++ +S G
Sbjct: 57  SSQKVHLESPKRADTVLALLKDRGFTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIG 116

Query: 367 FTSNDLCKMLEADLQILRRSLVNRIIPSCELLKSFLKDNASVIVAVKRNSRVLRNDISKT 188
            +S+DL + L +D  +L RS+ N+I+PS   LKS L  N  ++ A+KR + +   D SK 
Sbjct: 117 VSSSDLARTLSSDPTLLTRSIENQIVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKN 176

Query: 187 LIPNVDLLLNLGVPEYRILVMLRDQPRNLIQPTAKLKVIIEEIKELGFHPEKRSFLDAIH 8
           L+PNV+ L  +GV    I ++L + P  ++Q   +   +++E+KE+GF P+K  F+ A+H
Sbjct: 177 LMPNVERLREIGVTHSCISLLLTNFPEAVLQRHGEFNKVVKEVKEMGFDPKKSIFVMAVH 236


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  118 bits (296), Expect = 6e-25
 Identities = 62/181 (34%), Positives = 106/181 (58%), Gaps = 1/181 (0%)
 Frame = -1

Query: 547 LSSYRITKNVSSKLTSIKALFENYGFTDAQVSKLFKKHPSIVSLN-LGIVKPKLDYLHSY 371
           L+S ++      +  S+ AL  N+GF+  Q+S L KK P ++  N    + PKLD+  S 
Sbjct: 80  LTSQKVQFQSPERPDSVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSL 139

Query: 370 GFTSNDLCKMLEADLQILRRSLVNRIIPSCELLKSFLKDNASVIVAVKRNSRVLRNDISK 191
           G +   L + L +D  +L RSL N+I+PS   LK+ L+ +  ++ A KR + +   D+SK
Sbjct: 140 GMSRPHLARTLSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSK 199

Query: 190 TLIPNVDLLLNLGVPEYRILVMLRDQPRNLIQPTAKLKVIIEEIKELGFHPEKRSFLDAI 11
            LIPN++LL  +GVP+  I ++L   P  +++   +    +EE++++GF P K +F+ A+
Sbjct: 200 NLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAV 259

Query: 10  H 8
           H
Sbjct: 260 H 260


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/181 (33%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
 Frame = -1

Query: 547 LSSYRITKNVSSKLTSIKALFENYGFTDAQVSKLFKKHPSIVSLNL-GIVKPKLDYLHSY 371
           ++S ++  +   +  ++  L  ++GFT AQ+S L KK P ++  N   ++ PKL +  S 
Sbjct: 88  VASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSI 147

Query: 370 GFTSNDLCKMLEADLQILRRSLVNRIIPSCELLKSFLKDNASVIVAVKRNSRVLRNDISK 191
           G + + L + L +D  IL RSLVN++IPS   LKS L  +  ++ A++R + V   D +K
Sbjct: 148 GVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTK 207

Query: 190 TLIPNVDLLLNLGVPEYRILVMLRDQPRNLIQPTAKLKVIIEEIKELGFHPEKRSFLDAI 11
            L+PN++ +   GVPE  I ++L   P  ++Q   + + I ++ +E+GF+P+K +F+ AI
Sbjct: 208 NLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAI 267

Query: 10  H 8
           H
Sbjct: 268 H 268


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/162 (37%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
 Frame = -1

Query: 490 LFENYGFTDAQVSKLFKKHPSIVSLNL-GIVKPKLDYLHSYGFTSNDLCKMLEADLQILR 314
           L  ++GFT AQ+S L KK P ++  N   ++ PKL +  S G + + L + L +D  IL 
Sbjct: 106 LLRDHGFTTAQISTLVKKRPVLLLANAESVLLPKLLFFLSIGVSKSLLARTLASDPTILT 165

Query: 313 RSLVNRIIPSCELLKSFLKDNASVIVAVKRNSRVLRNDISKTLIPNVDLLLNLGVPEYRI 134
           RSLVN++IPS + LKS L  +  ++ A++R + V   D +K L+PN++ +   GVPE  I
Sbjct: 166 RSLVNQLIPSYKFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMSETGVPEKCI 225

Query: 133 LVMLRDQPRNLIQPTAKLKVIIEEIKELGFHPEKRSFLDAIH 8
            ++L   P  ++Q + + + I ++ +E+GF+P+K +F+ AIH
Sbjct: 226 KLLLTHFPEAVMQKSHEFQAIAKQAQEMGFNPQKSTFVLAIH 267


>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
           gi|297744182|emb|CBI37152.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  112 bits (281), Expect = 3e-23
 Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
 Frame = -1

Query: 502 SIKALFENYGFTDAQVSKLFKKHPSIVSLNLG-IVKPKLDYLHSYGFTSNDLCKMLEADL 326
           S+  L  NYG TDAQ+ KL +  PS++  +    + PKL++LHS  FT  DL ++L +  
Sbjct: 95  SVLTLLRNYGITDAQLPKLLRVFPSLLLADPEKTLLPKLEFLHSKAFTRADLGRILSSCP 154

Query: 325 QILRRSLVNRIIPSCELLKSFLKDNASVIVAVKRNSRVLRNDISKTLIPNVDLLLNLGVP 146
            IL RSL N+IIP    LKS L+ + +V+ A KR+ R+L  ++ K ++P +  L  +GVP
Sbjct: 155 LILSRSLDNQIIPCHNFLKSILRLDKTVVSACKRSPRILLENVKKNIVPKITALQEIGVP 214

Query: 145 EYRILVMLRDQPRNLIQPTAKLKVIIEEIKELGFHPEKRSFLDAIHLF 2
           +  ++ +++  P  +     K   I++E+ E GF P K  F+ AI +F
Sbjct: 215 QSSVVFLIKHYPYVVQLKNDKFHEIVKEVMESGFDPLKMVFITAIQVF 262


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