BLASTX nr result

ID: Angelica22_contig00030435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030435
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus c...    72   6e-11
ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis...    68   9e-10
gb|AFK36574.1| unknown [Lotus japonicus]                               68   9e-10

>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 30/58 (51%), Positives = 44/58 (75%)
 Frame = +3

Query: 54  VKLPKIEPGKKNNFSLGVADPELGYHLYEVAKIPCQSTTFIREILLGLDLHIRSYLED 227
           + LPK++ GKK  FSLGVA+P++G H++EV KIPCQS  F+ E+L G+ LH   +++D
Sbjct: 81  LNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKIPCQSNEFVHELLRGVRLHFERFIKD 138


>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = +3

Query: 54  VKLPKIEPGKKNNFSLGVADPELGYHLYEVAKIPCQSTTFIREILLGLDLHIRSYLED 227
           + LPK++ GKK  FSLGVA+P++G H++EV K+PCQS  F+ E+L G+ LH   +++D
Sbjct: 81  LNLPKVKEGKKAKFSLGVAEPKIGSHIFEVTKLPCQSNDFVHELLRGVRLHFERFIKD 138


>ref|XP_002511213.1| nucleolar protein nop56, putative [Ricinus communis]
           gi|223550328|gb|EEF51815.1| nucleolar protein nop56,
           putative [Ricinus communis]
          Length = 558

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = +3

Query: 54  VKLPKIEPGKKNNFSLGVADPELGYHLYEVAKIPCQSTTFIREILLGLDLHIRSYLED 227
           + LPK++ GKK  FSLGV++P+LG H++EV KIPCQS  F+ E++ G+ LH   +++D
Sbjct: 81  LNLPKVKEGKKAKFSLGVSEPKLGSHIFEVTKIPCQSNEFVLELIRGVRLHFERFIKD 138


>ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis thaliana]
           gi|6056371|gb|AAF02835.1|AC009894_6 nucleolar protein
           [Arabidopsis thaliana]
           gi|11878189|gb|AAG40838.1|AF302492_1 NOP56-like protein
           [Arabidopsis thaliana] gi|14517412|gb|AAK62596.1|
           At1g56110/T6H22_9 [Arabidopsis thaliana]
           gi|20857405|gb|AAM26718.1| At1g56110/T6H22_9
           [Arabidopsis thaliana] gi|21592692|gb|AAM64641.1| SAR
           DNA binding protein, putative [Arabidopsis thaliana]
           gi|332195224|gb|AEE33345.1| homolog of nucleolar protein
           NOP56 [Arabidopsis thaliana]
          Length = 522

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = +3

Query: 54  VKLPKIEPGKKNNFSLGVADPELGYHLYEVAKIPCQSTTFIREILLGLDLHIRSYLED 227
           + LPK++ GKK  FSLG+A+P+LG H++E  KIPCQS  F+ E+L G+  H   +++D
Sbjct: 81  LNLPKVKEGKKPKFSLGLAEPKLGSHIFEATKIPCQSNEFVLELLRGVRQHFDRFIKD 138


>gb|AFK36574.1| unknown [Lotus japonicus]
          Length = 546

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +3

Query: 60  LPKIEPGKKNNFSLGVADPELGYHLYEVAKIPCQSTTFIREILLGLDLHIRSYLED 227
           LPK++ GKK  FSLGV+DP++G  + EV+KIPCQS  F+ E+L G+ LH   ++ D
Sbjct: 84  LPKVKEGKKPKFSLGVSDPKIGSQIAEVSKIPCQSNEFVSELLRGVRLHFNKFIGD 139


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