BLASTX nr result

ID: Angelica22_contig00030379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030379
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated...    99   3e-19
ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i...    99   3e-19
ref|XP_002315473.1| chromatin remodeling complex subunit [Populu...    99   3e-19
gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from ...    99   4e-19
ref|NP_175265.3| chromatin remodeling factor18 [Arabidopsis thal...    99   4e-19

>ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1-like
           [Glycine max]
          Length = 751

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/50 (94%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   DIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVLQSKLDNLGQMLDG 152
           D+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDV+QSKL+NLGQMLDG
Sbjct: 633 DLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDG 682


>ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
           communis] gi|223541656|gb|EEF43205.1| Chromatin
           remodelling complex ATPase chain isw-1, putative
           [Ricinus communis]
          Length = 674

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/50 (94%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   DIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVLQSKLDNLGQMLDG 152
           D+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDV+QSKL+NLGQMLDG
Sbjct: 579 DLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDG 628


>ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222864513|gb|EEF01644.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 670

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/50 (94%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   DIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVLQSKLDNLGQMLDG 152
           D+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDV+QSKL+NLGQMLDG
Sbjct: 576 DLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDG 625


>gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from Homo sapiens gb|AF210842. It
           contains SNF2 N-terminal PF|00176 and helicase
           C-terminal PF|00271 domains [Arabidopsis thaliana]
          Length = 592

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/50 (94%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   DIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVLQSKLDNLGQMLDG 152
           D+IQAEDRAHRIGQVSSVNI+YLLANDTVDDIIWDV+QSKLDNLGQMLDG
Sbjct: 488 DLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 537


>ref|NP_175265.3| chromatin remodeling factor18 [Arabidopsis thaliana]
           gi|332194152|gb|AEE32273.1| chromatin remodeling
           factor18 [Arabidopsis thaliana]
          Length = 673

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/50 (94%), Positives = 50/50 (100%)
 Frame = +3

Query: 3   DIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVLQSKLDNLGQMLDG 152
           D+IQAEDRAHRIGQVSSVNI+YLLANDTVDDIIWDV+QSKLDNLGQMLDG
Sbjct: 569 DLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 618


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