BLASTX nr result

ID: Angelica22_contig00030374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030374
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002528778.1| pentatricopeptide repeat-containing protein,...   107   8e-22
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/102 (57%), Positives = 76/102 (74%)
 Frame = -2

Query: 306 ILKLTHPILHTLDSKNASLKNFKQVQTQLIISGLFQDSLAFSRVVKKLCSLPNGVDYAVE 127
           ILKL+HPIL TL+S   S K F Q+ TQLI+SGL Q  LA  R VK LCS P+ V +AV 
Sbjct: 54  ILKLSHPILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVS 113

Query: 126 LFDHFDKPDAFICNTIIRCFVNLNDPLSGLGFYYDKMIGRFV 1
           LF+  ++PDAFICNTI+R +VN+NDP + LGFYY++M+ + V
Sbjct: 114 LFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCV 155


>ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|222870244|gb|EEF07375.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/101 (51%), Positives = 70/101 (69%)
 Frame = -2

Query: 303 LKLTHPILHTLDSKNASLKNFKQVQTQLIISGLFQDSLAFSRVVKKLCSLPNGVDYAVEL 124
           L L HPIL  L+    ++K F Q+ TQL + GLFQ   A SR +KKLC+  N V + V L
Sbjct: 54  LDLNHPILQKLEQSCTNIKQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSL 113

Query: 123 FDHFDKPDAFICNTIIRCFVNLNDPLSGLGFYYDKMIGRFV 1
           ++H ++PDAF+CNTI+R FVN+NDP   L FYY+KMI ++V
Sbjct: 114 YNHIEEPDAFMCNTIMRSFVNVNDPFGALRFYYEKMIAKWV 154


>ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531781|gb|EEF33600.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/104 (51%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
 Frame = -2

Query: 306 ILKLTHPILHTLDSKNASLKNFKQVQTQLIISGLFQDSLAFSRVVKKLCSLP-NGVDYAV 130
           +L L H +L  L+    ++K F Q+ TQLI+ GLFQ  LA  R +KKLC+   N + + V
Sbjct: 49  VLDLNHQLLQKLELSCINIKQFNQIHTQLIVLGLFQHPLAAGRYIKKLCNTYFNLLSHCV 108

Query: 129 ELFDHFDKPDAFICNTIIRCFVNL-NDPLSGLGFYYDKMIGRFV 1
            L+D+ ++PDAFICNTIIRCFV+L NDP   L FYYDKMI ++V
Sbjct: 109 YLYDYIEQPDAFICNTIIRCFVSLNNDPFGALRFYYDKMIAKWV 152


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/97 (43%), Positives = 51/97 (52%)
 Frame = -2

Query: 291 HPILHTLDSKNASLKNFKQVQTQLIISGLFQDSLAFSRVVKKLCSLPNGVDYAVELFDHF 112
           H +L        +L    QV +QLI+SGL Q  L  +  +KKLCS       A  LFDH 
Sbjct: 7   HEVLFAALESWKNLHELNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHL 66

Query: 111 DKPDAFICNTIIRCFVNLNDPLSGLGFYYDKMIGRFV 1
             PDAF CNTIIR +    D  + L FYY KM+ R V
Sbjct: 67  HHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLARSV 103


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = -2

Query: 297 LTHPILHTLDSKNASLKNFKQVQTQLIISGLFQDSLAFSRVVKKLCSLP-NGVDYAVELF 121
           LT PIL T   K  ++K F Q+ +Q+I+SG F+DS A SR++K    LP   ++ + ++F
Sbjct: 24  LTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIF 83

Query: 120 DHFDKPDAFICNTIIRCFVNLNDPLSGLGFY 28
            H + P+ FICNT+++ ++  N P   +  Y
Sbjct: 84  SHIENPNGFICNTMMKGYMQRNSPCKAIWVY 114


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