BLASTX nr result

ID: Angelica22_contig00030253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030253
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         120   1e-25
ref|XP_002301908.1| glutamate-gated kainate-type ion channel rec...   115   5e-24
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...   112   4e-23
ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec...   111   6e-23
ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   110   2e-22

>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 70/77 (90%)
 Frame = +3

Query: 294 RPAVVNIGAVFTFDSTIGKASYFAIKEAVNDVNSNSSVLHGTKLQVEMHNSNCSGFHGII 473
           RPAVV++GA+FTFDSTIG+A+  AI+EAV DVNSNSS+L GTKL V++ NSNCSGF G++
Sbjct: 33  RPAVVSVGAIFTFDSTIGRAAKIAIQEAVKDVNSNSSILQGTKLVVQLQNSNCSGFLGMV 92

Query: 474 GAVQFMETDIVAVIGPQ 524
           GA++FMETD+VAVIGPQ
Sbjct: 93  GALKFMETDVVAVIGPQ 109


>ref|XP_002301908.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843634|gb|EEE81181.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 859

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/77 (70%), Positives = 68/77 (88%)
 Frame = +3

Query: 294 RPAVVNIGAVFTFDSTIGKASYFAIKEAVNDVNSNSSVLHGTKLQVEMHNSNCSGFHGII 473
           RPAVVNIGA+FTF+S+IG+ +  AI+EAV DVN+NSS+L GTKL V+M NSNCSGF G++
Sbjct: 20  RPAVVNIGALFTFESSIGRVAKIAIQEAVKDVNANSSILRGTKLNVDMRNSNCSGFLGMV 79

Query: 474 GAVQFMETDIVAVIGPQ 524
            A++FMETDIVA+IGPQ
Sbjct: 80  EALRFMETDIVAIIGPQ 96


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 927

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/77 (64%), Positives = 67/77 (87%)
 Frame = +3

Query: 294 RPAVVNIGAVFTFDSTIGKASYFAIKEAVNDVNSNSSVLHGTKLQVEMHNSNCSGFHGII 473
           RPAVV+IGA+FT DSTIG+ +  AI+EAV DVN+NSS+LHGT+L + + NSNCSGF G++
Sbjct: 28  RPAVVSIGAIFTLDSTIGRVAKVAIEEAVKDVNANSSILHGTRLALHIQNSNCSGFSGMV 87

Query: 474 GAVQFMETDIVAVIGPQ 524
            A++FMETD+VA++GPQ
Sbjct: 88  EALRFMETDVVAILGPQ 104


>ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222856437|gb|EEE93984.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 897

 Score =  111 bits (278), Expect = 6e-23
 Identities = 50/77 (64%), Positives = 66/77 (85%)
 Frame = +3

Query: 294 RPAVVNIGAVFTFDSTIGKASYFAIKEAVNDVNSNSSVLHGTKLQVEMHNSNCSGFHGII 473
           RPAVVNIGA+FTF+STIG+ +  AI+EAV DVN+NSS+LHGT+L++ M NSNCSGF G+ 
Sbjct: 19  RPAVVNIGAIFTFESTIGRVAKIAIQEAVKDVNANSSILHGTELKIHMKNSNCSGFLGLA 78

Query: 474 GAVQFMETDIVAVIGPQ 524
            A++F E D++A+IGPQ
Sbjct: 79  EALKFTENDVIAIIGPQ 95


>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
           gi|297745576|emb|CBI40741.3| unnamed protein product
           [Vitis vinifera]
          Length = 934

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/77 (67%), Positives = 65/77 (84%)
 Frame = +3

Query: 294 RPAVVNIGAVFTFDSTIGKASYFAIKEAVNDVNSNSSVLHGTKLQVEMHNSNCSGFHGII 473
           RPAVVN+GAVFTF+STIG+ +  AI+EAV DVNS++ VL GTK  + M NSNCSGF G+I
Sbjct: 28  RPAVVNVGAVFTFESTIGRVAKIAIEEAVKDVNSDAGVLTGTKFVLTMRNSNCSGFIGMI 87

Query: 474 GAVQFMETDIVAVIGPQ 524
           GA+QFMET+ +A+IGPQ
Sbjct: 88  GALQFMETETIAIIGPQ 104


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