BLASTX nr result

ID: Angelica22_contig00030252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030252
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   219   6e-55
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              196   9e-48
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   196   9e-48
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   154   3e-35

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  219 bits (559), Expect = 6e-55
 Identities = 110/172 (63%), Positives = 132/172 (76%)
 Frame = +1

Query: 1   GNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESDIHSIPRFYDNSGI 180
           GNPH+VCGARVLVKPYREKSRL +RKFSEK+QHPMY  SH +D +S++H +P   DNS +
Sbjct: 410 GNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRL 469

Query: 181 LRKQVMEEHERLLEFERMRFSDMQLAAKSMNHHPYFGYAPSEMKLSEAHEEQPDFPSAER 360
           LRKQ+MEE+E  LEFER R  +  L  KS+NH  Y G +  E+KLSE H E   FPSAER
Sbjct: 470 LRKQLMEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEHAE---FPSAER 526

Query: 361 FNYLLDVLNNGSGTTEETMKHIETKYNDQESTQGLNLPDSPFASPMTSRIST 516
           FNYLLDVLNNGS ++E   + I T YNDQ+S QG+NLP+SPFASP+ S IST
Sbjct: 527 FNYLLDVLNNGS-SSEGKFRRISTNYNDQDS-QGINLPESPFASPIRSGIST 576


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  211 bits (536), Expect = 3e-52
 Identities = 102/172 (59%), Positives = 128/172 (74%)
 Frame = +1

Query: 1   GNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESDIHSIPRFYDNSGI 180
           GNPH VCGARVLVKPYREKSRL +RK++EK+QHP +Y  H +D +S++HS+PR  DNS +
Sbjct: 384 GNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRL 443

Query: 181 LRKQVMEEHERLLEFERMRFSDMQLAAKSMNHHPYFGYAPSEMKLSEAHEEQPDFPSAER 360
           LRKQ+MEEHE+ LE ER R S+ QLA K +  H Y G++  E KLSE  E+   FPSAE 
Sbjct: 444 LRKQLMEEHEQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSE--EQADQFPSAEH 501

Query: 361 FNYLLDVLNNGSGTTEETMKHIETKYNDQESTQGLNLPDSPFASPMTSRIST 516
           FNY  DVLNNGS T+EE  +H  T  ++Q+S QG+NLP+SPFAS +   IST
Sbjct: 502 FNYWFDVLNNGS-TSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGIST 552


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  196 bits (497), Expect = 9e-48
 Identities = 105/179 (58%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1   GNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAESDIHSIPRFYDNS 174
           GNPH++CGARVLVKPYREK  SR  +R+     QHPMYY  H +D +S++ SIPR  DNS
Sbjct: 359 GNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDEDSELQSIPRVCDNS 413

Query: 175 GILRKQ-VMEEHERLLEFERMRFSDMQLAAKSMNHHPYFGYAPSEMKLSE--AHEEQPDF 345
            +LRKQ +MEEHE+ LE ER R S++QL  K+   HPYFGY+  E K     AH EQ +F
Sbjct: 414 RLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFKQHSDAAHAEQAEF 471

Query: 346 PSAERFNYLLDVLNNGSGTTEETMKHIETKYNDQESTQGLNLPDSPFASPMTSRISTAT 522
           PSAER NYLL+VLNNGS     T +   T YN+QES+QGLNLP+SPFASP+ + IST T
Sbjct: 472 PSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPFASPIRNSISTVT 525


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  196 bits (497), Expect = 9e-48
 Identities = 105/179 (58%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1   GNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAESDIHSIPRFYDNS 174
           GNPH++CGARVLVKPYREK  SR  +R+     QHPMYY  H +D +S++ SIPR  DNS
Sbjct: 406 GNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDEDSELQSIPRVCDNS 460

Query: 175 GILRKQ-VMEEHERLLEFERMRFSDMQLAAKSMNHHPYFGYAPSEMKLSE--AHEEQPDF 345
            +LRKQ +MEEHE+ LE ER R S++QL  K+   HPYFGY+  E K     AH EQ +F
Sbjct: 461 RLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFKQHSDAAHAEQAEF 518

Query: 346 PSAERFNYLLDVLNNGSGTTEETMKHIETKYNDQESTQGLNLPDSPFASPMTSRISTAT 522
           PSAER NYLL+VLNNGS     T +   T YN+QES+QGLNLP+SPFASP+ + IST T
Sbjct: 519 PSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPFASPIRNSISTVT 572


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
           product [Vitis vinifera]
          Length = 544

 Score =  154 bits (389), Expect = 3e-35
 Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 2/174 (1%)
 Frame = +1

Query: 1   GNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESDIHSIPRFYDNSGI 180
           G+PH+VCGARVLVKPYREK R  +RK+ EK +  MYY     D +S++H +PR  + S +
Sbjct: 372 GSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMMPRGMETSRL 431

Query: 181 LRKQVMEEHE--RLLEFERMRFSDMQLAAKSMNHHPYFGYAPSEMKLSEAHEEQPDFPSA 354
           LRKQ+MEE E  + LEFE  R S +QLA   + +  + GY+  E+K+ EAH     FP+ 
Sbjct: 432 LRKQIMEEQEFAQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAHANHSKFPTV 491

Query: 355 ERFNYLLDVLNNGSGTTEETMKHIETKYNDQESTQGLNLPDSPFASPMTSRIST 516
              NY LDV NNGS + ++  + +    + + S  GL LPDSPFA P+ S IST
Sbjct: 492 VHSNYPLDVSNNGSTSDDKPWRAVNNPIDHKSS--GLELPDSPFAFPIGSSIST 543


Top