BLASTX nr result

ID: Angelica22_contig00030147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030147
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]   278   8e-73
ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266...   276   2e-72
emb|CBI23686.3| unnamed protein product [Vitis vinifera]              256   3e-66
gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]      255   6e-66
ref|XP_002528813.1| splicing factor u2af large subunit, putative...   243   4e-62

>emb|CAN81690.1| hypothetical protein VITISV_009755 [Vitis vinifera]
          Length = 544

 Score =  278 bits (711), Expect = 8e-73
 Identities = 149/244 (61%), Positives = 176/244 (72%), Gaps = 5/244 (2%)
 Frame = -2

Query: 723  RGQGELSAQSSKDRSGRSNSDFDSTRKSNNGFXXXXXXXXXSASKLGGYSPRKRRTESAA 544
            R   ELS+ S KDRSGR +SD D  R SNNG          SAS LGGYSPRKRRTE+A 
Sbjct: 283  REHAELSSHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAI 342

Query: 543  KTPSPTIRSPEKRSAGWDHPPSKSESSFNGSVLSNLQSSAQIVSANVPHVSMMVPVTSNT 364
            KTPSPT RSPEK++AGWD PPS+++    GSVLS+LQ     VS+N   +   VPV    
Sbjct: 343  KTPSPTNRSPEKKNAGWDLPPSRTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPV 402

Query: 363  TMTVVG-----VMSTALSPRVDTSLDSIQLTQATRPSRRLYVENLPTATSEESVMKCINK 199
            T T        + S A+S   + S+DSIQLTQATRP RRLYVENLP ++SE+++M+C+N 
Sbjct: 403  TATTAKPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNN 462

Query: 198  FILSSGGHHVQGTHPCISCIINKEKNQALVEFLTPEDASAALSLDGSTFEGSILKVRRPK 19
            F+LSSG +HVQGT PCISCII+KEK QALVEFLTPEDASAALS DG +F GSILK+RRPK
Sbjct: 463  FLLSSGINHVQGTPPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPK 522

Query: 18   DFFD 7
            DF D
Sbjct: 523  DFVD 526


>ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
          Length = 895

 Score =  276 bits (707), Expect = 2e-72
 Identities = 149/242 (61%), Positives = 174/242 (71%), Gaps = 5/242 (2%)
 Frame = -2

Query: 723  RGQGELSAQSSKDRSGRSNSDFDSTRKSNNGFXXXXXXXXXSASKLGGYSPRKRRTESAA 544
            R   ELS  S KDRSGR +SD D  R SNNG          SAS LGGYSPRKRRTE+A 
Sbjct: 283  REHAELSLHSLKDRSGRQHSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAI 342

Query: 543  KTPSPTIRSPEKRSAGWDHPPSKSESSFNGSVLSNLQSSAQIVSANVPHVSMMVPVTSNT 364
            KTPSPT RSPEK+SAGWD PPS+++    GSVLS+LQ     VS+N   +   VPV    
Sbjct: 343  KTPSPTNRSPEKKSAGWDLPPSRTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPV 402

Query: 363  TMTVVG-----VMSTALSPRVDTSLDSIQLTQATRPSRRLYVENLPTATSEESVMKCINK 199
            T T        + S A+S   + S+DSIQLTQATRP RRLYVENLP ++SE+++M+C+N 
Sbjct: 403  TATTAKPPLPRIYSDAVSKNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNN 462

Query: 198  FILSSGGHHVQGTHPCISCIINKEKNQALVEFLTPEDASAALSLDGSTFEGSILKVRRPK 19
            F+LSSG +HVQGT PCISCII+KEK QALVEFLTPEDASAALS DG +F GSILK+RRPK
Sbjct: 463  FLLSSGINHVQGTPPCISCIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPK 522

Query: 18   DF 13
            DF
Sbjct: 523  DF 524


>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  256 bits (654), Expect = 3e-66
 Identities = 140/226 (61%), Positives = 165/226 (73%), Gaps = 1/226 (0%)
 Frame = -2

Query: 681 SGRSNSDFDSTRKSNNGFXXXXXXXXXSASKLGGYSPRKRRTESAAKTPSPTIRSPEKRS 502
           S R +SD D  R SNNG          SAS LGGYSPRKRRTE+A KTPSPT RSPEK+S
Sbjct: 273 SRRQHSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKS 332

Query: 501 AGWDHPPSKSESSFNGSVLSNLQSSAQIVSANVPHVSMMVPVTSNTTMTVVG-VMSTALS 325
           AGWD PPS+++    GSVLSN   SA         V + VPVT+ T    +  + S A+S
Sbjct: 333 AGWDLPPSRTDGMNAGSVLSNELPSA---------VPVAVPVTATTAKPPLPRIYSDAVS 383

Query: 324 PRVDTSLDSIQLTQATRPSRRLYVENLPTATSEESVMKCINKFILSSGGHHVQGTHPCIS 145
              + S+DSIQLTQATRP RRLYVENLP ++SE+++M+C+N F+LSSG +HVQGT PCIS
Sbjct: 384 KNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLSSGINHVQGTPPCIS 443

Query: 144 CIINKEKNQALVEFLTPEDASAALSLDGSTFEGSILKVRRPKDFFD 7
           CII+KEK QALVEFLTPEDASAALS DG +F GSILK+RRPKDF D
Sbjct: 444 CIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVD 489


>gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 787

 Score =  255 bits (652), Expect = 6e-66
 Identities = 131/237 (55%), Positives = 162/237 (68%)
 Frame = -2

Query: 711 ELSAQSSKDRSGRSNSDFDSTRKSNNGFXXXXXXXXXSASKLGGYSPRKRRTESAAKTPS 532
           ELS  S K+RSGR  SD ++ + +N+            AS LGGYSPRKR+TE+A KTPS
Sbjct: 147 ELSLHSVKERSGRQQSDAENNQLANSSSSRHQRRHGGFASGLGGYSPRKRKTEAAVKTPS 206

Query: 531 PTIRSPEKRSAGWDHPPSKSESSFNGSVLSNLQSSAQIVSANVPHVSMMVPVTSNTTMTV 352
           P  RSPEK+SA WD  P ++ + F   +LSN QS  Q  S+N+  V   VPV S      
Sbjct: 207 PAKRSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSNIHEVVSAVPVVSAPMKPP 266

Query: 351 VGVMSTALSPRVDTSLDSIQLTQATRPSRRLYVENLPTATSEESVMKCINKFILSSGGHH 172
            GV  ++LS     S +SIQLTQAT P RRLY+EN+P + SE++VM C+N F++SSG HH
Sbjct: 267 SGVSLSSLSTATKVSTESIQLTQATHPIRRLYMENIPASASEKAVMDCLNNFLISSGVHH 326

Query: 171 VQGTHPCISCIINKEKNQALVEFLTPEDASAALSLDGSTFEGSILKVRRPKDFFDAS 1
           +QGT PCISCI  KEK QALVEFLTPEDASAALS DG +F GSI+KVRRPKDF + +
Sbjct: 327 IQGTQPCISCIRQKEKGQALVEFLTPEDASAALSFDGRSFSGSIIKVRRPKDFIEVA 383


>ref|XP_002528813.1| splicing factor u2af large subunit, putative [Ricinus communis]
           gi|223531725|gb|EEF33547.1| splicing factor u2af large
           subunit, putative [Ricinus communis]
          Length = 844

 Score =  243 bits (619), Expect = 4e-62
 Identities = 128/237 (54%), Positives = 161/237 (67%)
 Frame = -2

Query: 723 RGQGELSAQSSKDRSGRSNSDFDSTRKSNNGFXXXXXXXXXSASKLGGYSPRKRRTESAA 544
           R  GE S    K +SG+ +SD D  + +NNG          SAS+LGGYSPRKRR+E+AA
Sbjct: 251 REHGEPSLHFLKGKSGQQHSDIDRNKITNNGSTGHYKRHGGSASRLGGYSPRKRRSEAAA 310

Query: 543 KTPSPTIRSPEKRSAGWDHPPSKSESSFNGSVLSNLQSSAQIVSANVPHVSMMVPVTSNT 364
           +TPSPT  SPEK+ A WD  P  ++S+F+ SV    + S QI S N       VPV S  
Sbjct: 311 RTPSPTKHSPEKKKAKWDLAPEGADSTFSVSVPPIFKLSNQIASLNARATVSAVPVASIP 370

Query: 363 TMTVVGVMSTALSPRVDTSLDSIQLTQATRPSRRLYVENLPTATSEESVMKCINKFILSS 184
              + GV S  L    + ++DS+QLTQATRP RRLYVEN+P   SE++V++ +N  ++SS
Sbjct: 371 VKPLSGVSSNILLTNKNDTIDSVQLTQATRPMRRLYVENIPAEASEKAVLERLNNLLISS 430

Query: 183 GGHHVQGTHPCISCIINKEKNQALVEFLTPEDASAALSLDGSTFEGSILKVRRPKDF 13
           G +H+QGT PCISCII+KEK QALVEFLTPEDASAALS DGS F GS +K+RRPKDF
Sbjct: 431 GVNHIQGTQPCISCIIHKEKGQALVEFLTPEDASAALSFDGSYFSGSTIKIRRPKDF 487


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