BLASTX nr result

ID: Angelica22_contig00030125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030125
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95357.2| retrotransposon protein, putative, unclassified [...    98   8e-19
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]                97   1e-18
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...    95   7e-18
gb|ABA98724.1| retrotransposon protein, putative, unclassified [...    93   3e-17
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap...    92   3e-17

>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 41/73 (56%), Positives = 55/73 (75%)
 Frame = +2

Query: 8    LFWWPTILQDIIAYV*ACEVCQRFKGEHVRTPGLLQPTDIPHHSWQTVTMDFIESLPKSN 187
            LF WP + +D+  +V  C++CQR K EHV+ PGLLQP ++P  SWQ +TMDFIE LPKS 
Sbjct: 2370 LFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSA 2429

Query: 188  GFDTIMVVIDKFT 226
             FD I+V++DKF+
Sbjct: 2430 SFDCILVIVDKFS 2442


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +2

Query: 8    LFWWPTILQDIIAYV*ACEVCQRFKGEHVRTPGLLQPTDIPHHSWQTVTMDFIESLPKSN 187
            LF WP + +D+  +V  C++CQR K EHV+ PGLLQP ++P  SWQ +TMDFIE LP+S 
Sbjct: 1156 LFSWPGLRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPRSA 1215

Query: 188  GFDTIMVVIDKFT 226
             FD I+V++DKF+
Sbjct: 1216 SFDCILVIVDKFS 1228


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +2

Query: 8    LFWWPTILQDIIAYV*ACEVCQRFKGEHVRTPGLLQPTDIPHHSWQTVTMDFIESLPKSN 187
            LF WP +   ++ YV AC VCQ+ K EHV+ PG+LQP  +P H+WQ V++DF+E LPKS 
Sbjct: 1189 LFAWPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSA 1248

Query: 188  GFDTIMVVIDKFT 226
             F+ I+VV+DKF+
Sbjct: 1249 SFNCILVVVDKFS 1261


>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1269

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +2

Query: 8    LFWWPTILQDIIAYV*ACEVCQRFKGEHVRTPGLLQPTDIPHHSWQTVTMDFIESLPKSN 187
            LF WP + + +  +V AC +C++ K E VR PG LQP  +P H+WQTV++DFIE LP S+
Sbjct: 831  LFAWPGLRKAVRQFVSACSICKQAKAERVRYPGFLQPLPVPEHAWQTVSLDFIEGLPSSS 890

Query: 188  GFDTIMVVIDKFT 226
            GFD I+VV+DKF+
Sbjct: 891  GFDCILVVVDKFS 903


>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1065

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +2

Query: 8   LFWWPTILQDIIAYV*ACEVCQRFKGEHVRTPGLLQPTDIPHHSWQTVTMDFIESLPKSN 187
           LF WP +   ++ +V AC VCQ+ K EHV+ PG+LQP  +P H+WQ V++DFIE LPKS 
Sbjct: 698 LFAWPQLRTTVMQFVTACSVCQQAKSEHVKYPGMLQPLPVPDHAWQVVSLDFIEGLPKSA 757

Query: 188 GFDTIMVVIDKFT 226
            F+ I+VV+DKF+
Sbjct: 758 TFNCILVVVDKFS 770


Top