BLASTX nr result

ID: Angelica22_contig00030117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00030117
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel prot...   103   1e-20
ref|XP_002889201.1| mechanosensitive ion channel domain-containi...   101   6e-20
ref|NP_177982.1| mechanosensitive channel of small conductance-l...   100   1e-19
ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002306963.1| predicted protein [Populus trichocarpa] gi|222856412|gb|EEE93959.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/71 (69%), Positives = 64/71 (90%)
 Frame = -1

Query: 354 RLKISIWLSHRMNFQDMGERWVRRALLVEEIIKVCRELDIEYRMLPVDVNVRNMPATVSN 175
           ++K+S+W++HRMN Q+M ERWVRR LL+ E+IKV +ELDIEYR+LP+DVN+RNMP  VSN
Sbjct: 230 KMKMSLWVTHRMNHQEMEERWVRRNLLLGEMIKVFKELDIEYRVLPLDVNIRNMPPLVSN 289

Query: 174 RLPSNWTSCAD 142
           RLPSNWT+CA+
Sbjct: 290 RLPSNWTTCAN 300


>ref|XP_004144925.1| PREDICTED: mechanosensitive ion channel protein 6-like [Cucumis
            sativus] gi|449529323|ref|XP_004171649.1| PREDICTED:
            mechanosensitive ion channel protein 6-like [Cucumis
            sativus]
          Length = 955

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/71 (60%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
 Frame = -1

Query: 354  RLKISIWLSHRMNFQDMGERWVRRALLVEEIIKVCRELDIEYRMLPVDVNVRNMPATV-S 178
            ++K+++WLSHRMN QD GERW RR++LVEE++KVC+ELDI+YR+LP+D+N+R++P++  S
Sbjct: 884  KVKLAVWLSHRMNHQDSGERWARRSVLVEEVVKVCQELDIQYRLLPIDINIRSLPSSAPS 943

Query: 177  NRLPSNWTSCA 145
               PSNWTS A
Sbjct: 944  IGFPSNWTSPA 954


>ref|XP_002889201.1| mechanosensitive ion channel domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297335042|gb|EFH65460.1|
           mechanosensitive ion channel domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 857

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/73 (61%), Positives = 60/73 (82%), Gaps = 4/73 (5%)
 Frame = -1

Query: 351 LKISIWLSHRMNFQDMGERWVRRALLVEEIIKVCRELDIEYRMLPVDVNVRNMPAT---- 184
           ++I++W +HRMN QDMGE+W RR+ LVEEI K+CRELDIEYR+ P+D+NVRNMP +    
Sbjct: 781 VRIAVWPTHRMNHQDMGEKWARRSQLVEEIAKICRELDIEYRLYPLDINVRNMPTSTVLP 840

Query: 183 VSNRLPSNWTSCA 145
           VS+RLP NW++ A
Sbjct: 841 VSDRLPPNWSAPA 853


>ref|NP_177982.1| mechanosensitive channel of small conductance-like 6 [Arabidopsis
           thaliana] gi|75213461|sp|Q9SYM1.1|MSL6_ARATH RecName:
           Full=Mechanosensitive ion channel protein 6; AltName:
           Full=Mechanosensitive channel of small conductance-like
           6; AltName: Full=MscS-Like protein 6
           gi|4836872|gb|AAD30575.1|AC007260_6 Hypothetical protein
           [Arabidopsis thaliana] gi|332198006|gb|AEE36127.1|
           mechanosensitive channel of small conductance-like 6
           [Arabidopsis thaliana]
          Length = 856

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/73 (60%), Positives = 60/73 (82%), Gaps = 4/73 (5%)
 Frame = -1

Query: 351 LKISIWLSHRMNFQDMGERWVRRALLVEEIIKVCRELDIEYRMLPVDVNVRNMPAT---- 184
           ++I++W +HRMN QDMGE+W RR+ LVEEI K+CRELDIEYR+ P+D+NVRN+P +    
Sbjct: 780 VRIAVWPTHRMNHQDMGEKWARRSQLVEEIAKICRELDIEYRLYPLDINVRNLPTSTALP 839

Query: 183 VSNRLPSNWTSCA 145
           VS+RLP NW++ A
Sbjct: 840 VSDRLPPNWSAPA 852


>ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|222860505|gb|EEE98052.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 40/67 (59%), Positives = 61/67 (91%)
 Frame = -1

Query: 354 RLKISIWLSHRMNFQDMGERWVRRALLVEEIIKVCRELDIEYRMLPVDVNVRNMPATVSN 175
           R++I++WL+HRMN QDMGER+VRR+LL++E++++ RELD++YR+LP+D+NVR +P   S+
Sbjct: 489 RVRIAVWLTHRMNHQDMGERFVRRSLLLDEMMRIFRELDMQYRLLPLDINVRALPPVTSD 548

Query: 174 RLPSNWT 154
           RLP+NWT
Sbjct: 549 RLPANWT 555


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