BLASTX nr result
ID: Angelica22_contig00030104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00030104
(1412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 324 3e-86
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 324 3e-86
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 324 3e-86
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2... 323 5e-86
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 307 5e-81
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 324 bits (831), Expect = 3e-86
Identities = 158/296 (53%), Positives = 207/296 (69%)
Frame = +2
Query: 503 VLDCMRLDGYLLDNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVY 682
V DCMR DG L D+++ E LV S+A GK D AK + ++S FVY
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGI--------KVSPFVY 182
Query: 683 NNFLSLLVKKNQVNEAVGFFRDHILRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLNDM 862
NN L++LVK+N V+EAV FR+H+ PD +FNI++RG+C++GE DKA +M
Sbjct: 183 NNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 863 NTFGCLPDVVSYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGE 1042
FGC PD+VSYN LINGFCR+ + + +LL+E PDV++YTS+ISGYC+LG+
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
Query: 1043 MDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTS 1222
M AS LFD+M+S GIKPN TFN +IDGFGK G+M SA+ MY +ML LGC PDVVT+TS
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
Query: 1223 LIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQL 1390
LIDG+CR G+V+ GLKLW E+ R L PNVYT++V+IN LCK+NR+ EAR+FL+ L
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Score = 83.2 bits (204), Expect = 2e-13
Identities = 40/165 (24%), Positives = 89/165 (53%)
Frame = +2
Query: 893 SYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGEMDKASNLFDQ 1072
+Y++L+ C++G + +++++ + D PD ++S Y R+G++D A N ++
Sbjct: 111 TYDLLMRNLCKVG-LNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 1073 MISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTSLIDGHCRMGQ 1252
+ GIK + +N +++ K + A+ ++ L PDV ++ LI G CR+G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 1253 VDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQ 1387
+D + + + P++ +++ +ING C+ N +++ D LK+
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/130 (25%), Positives = 65/130 (50%)
Frame = +2
Query: 1001 SYTSVISGYCRLGEMDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARM 1180
+Y ++ C++G D A +FD M S GI P+ ++ + + G + SA + +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 1181 LYLGCPPDVVTYTSLIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRL 1360
G Y +L++ + VD + L+ E L P+VY+F+++I GLC+ +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 1361 NEARDFLKQL 1390
++A +F + +
Sbjct: 231 DKAFEFFQNM 240
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 324 bits (831), Expect = 3e-86
Identities = 158/296 (53%), Positives = 207/296 (69%)
Frame = +2
Query: 503 VLDCMRLDGYLLDNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVY 682
V DCMR DG L D+++ E LV S+A GK D AK + ++S FVY
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGI--------KVSPFVY 182
Query: 683 NNFLSLLVKKNQVNEAVGFFRDHILRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLNDM 862
NN L++LVK+N V+EAV FR+H+ PD +FNI++RG+C++GE DKA +M
Sbjct: 183 NNLLNMLVKQNLVDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNM 240
Query: 863 NTFGCLPDVVSYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGE 1042
FGC PD+VSYN LINGFCR+ + + +LL+E PDV++YTS+ISGYC+LG+
Sbjct: 241 GNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGD 300
Query: 1043 MDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTS 1222
M AS LFD+M+S GIKPN TFN +IDGFGK G+M SA+ MY +ML LGC PDVVT+TS
Sbjct: 301 MKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTS 360
Query: 1223 LIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQL 1390
LIDG+CR G+V+ GLKLW E+ R L PNVYT++V+IN LCK+NR+ EAR+FL+ L
Sbjct: 361 LIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Score = 83.2 bits (204), Expect = 2e-13
Identities = 40/165 (24%), Positives = 89/165 (53%)
Frame = +2
Query: 893 SYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGEMDKASNLFDQ 1072
+Y++L+ C++G + +++++ + D PD ++S Y R+G++D A N ++
Sbjct: 111 TYDLLMRNLCKVG-LNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 1073 MISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTSLIDGHCRMGQ 1252
+ GIK + +N +++ K + A+ ++ L PDV ++ LI G CR+G+
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 1253 VDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQ 1387
+D + + + P++ +++ +ING C+ N +++ D LK+
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKE 274
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/130 (25%), Positives = 65/130 (50%)
Frame = +2
Query: 1001 SYTSVISGYCRLGEMDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARM 1180
+Y ++ C++G D A +FD M S GI P+ ++ + + G + SA + +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 1181 LYLGCPPDVVTYTSLIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRL 1360
G Y +L++ + VD + L+ E L P+VY+F+++I GLC+ +
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 1361 NEARDFLKQL 1390
++A +F + +
Sbjct: 231 DKAFEFFQNM 240
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Vitis vinifera]
Length = 641
Score = 324 bits (831), Expect = 3e-86
Identities = 160/304 (52%), Positives = 215/304 (70%), Gaps = 1/304 (0%)
Frame = +2
Query: 503 VLDCMRLDGYLLDNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVY 682
V DCM +DG+ D ++ FLV S +AGKF++A+ EF ++ VY
Sbjct: 159 VYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEFSLV-------------VY 205
Query: 683 NNFLSLLVKKNQVNEAVGFFRDHI-LRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLND 859
N L+ LV+ NQV+EAV FFR+ + L D+C+FNI++RG+C++G+ DKA L N+
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFREQMGLHGPF---DSCSFNILIRGLCRIGKVDKAFELFNE 262
Query: 860 MNTFGCLPDVVSYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLG 1039
M FGC PDV++YN LINGFCR+ V R +LL+E+ S++ PDVV+YTS+ISGYC+LG
Sbjct: 263 MRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG 322
Query: 1040 EMDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYT 1219
+M+KAS LF+ MIS GIKPN TFN +I+GFGK GDM SA +MY ML LGCPPD++T+T
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382
Query: 1220 SLIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQLNCR 1399
SLIDGHCR G+V+ LKLW+E+ R L PN YTF+++ N LCK+NRL+EAR FL+ L R
Sbjct: 383 SLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWR 442
Query: 1400 GDIA 1411
+A
Sbjct: 443 HIVA 446
>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 323 bits (829), Expect = 5e-86
Identities = 158/296 (53%), Positives = 212/296 (71%)
Frame = +2
Query: 503 VLDCMRLDGYLLDNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVY 682
V D M DG+L D+ L FLV A A FD+ K+L L + RI+SFVY
Sbjct: 95 VFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKL--------LAEVQGKEVRINSFVY 146
Query: 683 NNFLSLLVKKNQVNEAVGFFRDHILRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLNDM 862
NN LS+LVK+NQV+EA+ F+++++ PDT TFNI++RG+C+VG D+A + DM
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFKDM 204
Query: 863 NTFGCLPDVVSYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGE 1042
+FGCLPDVV+YN LING C+ V R EL +EIQS+ PD+V+YTS+ISG+C+ G+
Sbjct: 205 ESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGK 264
Query: 1043 MDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTS 1222
M +ASNLF++M+ GI+PN++TFN +IDGFGK G++ A +MY +M Y C DVVT+TS
Sbjct: 265 MKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTS 324
Query: 1223 LIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQL 1390
LIDG+CR GQV+HGLK WN + TR + P VYT++V+IN LCK+NRLNEARDFL Q+
Sbjct: 325 LIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQI 380
Score = 93.6 bits (231), Expect = 1e-16
Identities = 64/245 (26%), Positives = 108/245 (44%)
Frame = +2
Query: 539 DNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVYNNFLSLLVKKNQ 718
D + ++ F +GK A LF +++SG + +N + K
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEE----MMRSGIQP----NVITFNVLIDGFGKIGN 299
Query: 719 VNEAVGFFRDHILRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLNDMNTFGCLPDVVSY 898
+ EA +R C D TF ++ G C+ G+ + L N M T P V +Y
Sbjct: 300 IAEAEAMYRKMAYFD--CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTY 357
Query: 899 NILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGEMDKASNLFDQMI 1078
+LIN C+ + A + L +I++ P Y VI G+C+ G +D+ + + +M
Sbjct: 358 AVLINALCKENRLNEARDFLGQIKNSSII-PKPFMYNPVIDGFCKAGNVDEGNVILKEME 416
Query: 1079 SRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTSLIDGHCRMGQVD 1258
+ P+ VTF +I G G M A++++ RML C PD +T SLI + G +
Sbjct: 417 EKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPN 476
Query: 1259 HGLKL 1273
++
Sbjct: 477 EAYRI 481
Score = 79.3 bits (194), Expect = 2e-12
Identities = 41/171 (23%), Positives = 84/171 (49%)
Frame = +2
Query: 893 SYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGEMDKASNLFDQ 1072
+YN+L+ C++G+ + + + S H PD +++ + + D L +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHL-PDSKLLGFLVTWMAQASDFDMVKKLLAE 133
Query: 1073 MISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTSLIDGHCRMGQ 1252
+ + ++ N +N ++ K + A+ ++ L + PPD T+ LI G CR+G
Sbjct: 134 VQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGG 193
Query: 1253 VDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQLNCRGD 1405
VD +++ ++ + P+V T++ +INGLCK N + + K++ R D
Sbjct: 194 VDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSD 244
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 307 bits (786), Expect = 5e-81
Identities = 152/298 (51%), Positives = 214/298 (71%)
Frame = +2
Query: 503 VLDCMRLDGYLLDNALFEFLVMSFANAGKFDVAKELFIAQEFLILQSGSDRVGRISSFVY 682
V+ MR DG+L+D+ + FLV SFA AGKFD+AK+L I + RISSFVY
Sbjct: 115 VIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQ--------GEEARISSFVY 166
Query: 683 NNFLSLLVKKNQVNEAVGFFRDHILRSKCCYPDTCTFNIVLRGMCKVGEPDKALVLLNDM 862
N L+ LVK +V+EA+ F++++ P+T TFNI++RG+C+VGE +K L N M
Sbjct: 167 NYLLNELVKGGKVHEAIFLFKENLAFHSP--PNTWTFNILIRGLCRVGEVEKGFELFNAM 224
Query: 863 NTFGCLPDVVSYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGE 1042
+FGCLPDVV+YN LI+G C+ + RA +LL+E+QS++ PDV++YTS+ISG+ +LG+
Sbjct: 225 QSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGK 284
Query: 1043 MDKASNLFDQMISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTS 1222
++ AS LF++MI GI+P +VTFN +IDGFGK G+M +A +M+ +M C PDVVT+TS
Sbjct: 285 LEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTS 344
Query: 1223 LIDGHCRMGQVDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQLNC 1396
LIDG+CR G + GLK+W+ + R + PN+YT+SVIIN LCK NR++EARD L+QL C
Sbjct: 345 LIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKC 402
Score = 82.8 bits (203), Expect = 2e-13
Identities = 46/171 (26%), Positives = 89/171 (52%)
Frame = +2
Query: 893 SYNILINGFCRIGNVVRASELLREIQSQDHFQPDVVSYTSVISGYCRLGEMDKASNLFDQ 1072
+Y +LI C++G ++ ++S H V +++ + + G+ D A L +
Sbjct: 95 TYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRV-LGFLVTSFAQAGKFDLAKKLIIE 153
Query: 1073 MISRGIKPNLVTFNAVIDGFGKTGDMTSALSMYARMLYLGCPPDVVTYTSLIDGHCRMGQ 1252
+ + + +N +++ K G + A+ ++ L PP+ T+ LI G CR+G+
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213
Query: 1253 VDHGLKLWNEILTRKLHPNVYTFSVIINGLCKQNRLNEARDFLKQLNCRGD 1405
V+ G +L+N + + P+V T++ +I+GLCK N L+ A D LK++ R D
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRND 264