BLASTX nr result

ID: Angelica22_contig00029988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029988
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   216   2e-54
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   132   2e-29
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   129   2e-28
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   129   2e-28
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        129   2e-28

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  216 bits (549), Expect = 2e-54
 Identities = 103/111 (92%), Positives = 106/111 (95%)
 Frame = +2

Query: 2    VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDNLSAICLAKDQVHHERTK 181
            VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQA VYCD+LSAICLAKDQVHHERTK
Sbjct: 1197 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERTK 1256

Query: 182  HINVRYHFLRSEKRIKVSKVGTADNPADMLIKPVPHSKFQHCLDLLNVRSC 334
            HI+VRYHFLRSEKRIKV KVGTADNPADM  KPVP SKFQHCLDLLN+RSC
Sbjct: 1257 HIDVRYHFLRSEKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNIRSC 1307


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 3/114 (2%)
 Frame = +2

Query: 2    VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDNLSAICLAKDQVHHERTK 181
            V LSTTEAEYMA+TEA KE IWLKG+  +L ++  + +VYCDN SAI LAK+Q  HER+K
Sbjct: 1095 VALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSK 1154

Query: 182  HINVRYHFLR---SEKRIKVSKVGTADNPADMLIKPVPHSKFQHCLDLLNVRSC 334
            HI+VR HF+R   +   I V KV T DNP+DML K +  +KF+HCL+L+N+  C
Sbjct: 1155 HIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLINMGDC 1208


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
 Frame = +2

Query: 2    VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDNLSAICLAKDQVHHERTK 181
            V LSTTEAEYMA++EA KE IWL+GL ++L        ++CD+ SAICL KDQ+ HERTK
Sbjct: 1026 VALSTTEAEYMAISEACKETIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTK 1085

Query: 182  HINVRYHFLRS---EKRIKVSKVGTADNPADMLIKPVPHSKFQHCLDLLNV 325
            HI+VRYHF+RS   E  +KV K+ T DNPADM+ KPVP +KF+ C  L+ V
Sbjct: 1086 HIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGV 1136


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 3/113 (2%)
 Frame = +2

Query: 2   VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDNLSAICLAKDQVHHERTK 181
           V LSTTEAEYM+LTE  KEG+WL G +  LGL+  + ++YCD+ SA+CLAK+ V+HERTK
Sbjct: 659 VALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSKPVIYCDSQSALCLAKNLVYHERTK 718

Query: 182 HINVRYHFLR---SEKRIKVSKVGTADNPADMLIKPVPHSKFQHCLDLLNVRS 331
           HI+VR +F+R    EK   + KV T  NPADML KP+   KF+H LDL  + S
Sbjct: 719 HIDVRLNFIRDVIEEKLFSIEKVATEVNPADMLTKPITTEKFKHSLDLGKIPS 771


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
 Frame = +2

Query: 2    VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDNLSAICLAKDQVHHERTK 181
            V LSTTEAEYMA++EA KE IWL+GL ++L        ++CD+ SAICL KDQ+ HERTK
Sbjct: 1069 VALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTK 1128

Query: 182  HINVRYHFLR---SEKRIKVSKVGTADNPADMLIKPVPHSKFQHCLDLLNV 325
            HI+VRYHF+R   +E  +KV K+ T DNPADM+ KPVP +KF+ C  L+ V
Sbjct: 1129 HIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGV 1179


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