BLASTX nr result

ID: Angelica22_contig00029932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029932
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...    73   3e-11
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    72   5e-11
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...    71   8e-11
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...    69   5e-10
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...    68   7e-10

>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = -1

Query: 159 KHFLNAGDDLISKLPEDCLGLIFQSLSSGDRKSCSLVCKRWFAIEAQSRQRLN 1
           ++ L    D IS LP++CL  IFQSLSSGDRKSCSLVC+RW  IE QSR RL+
Sbjct: 41  EYVLVEAPDYISDLPDECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLS 93


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -1

Query: 165 NLKHFLNAGDDLISKLPEDCLGLIFQSLSSGDRKSCSLVCKRWFAIEAQSRQRLN 1
           +++  ++   D IS LP++CL  IFQSLSS DRK CSLVC+RWF +E QSR RL+
Sbjct: 40  DVQEIIHGASDFISDLPDECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLS 94


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = -1

Query: 141 GDDLISKLPEDCLGLIFQSLSSGDRKSCSLVCKRWFAIEAQSRQRLN 1
           G D IS LP++CL  IFQSL+SGDRK CSLVC+RW  IE QSR RL+
Sbjct: 48  GPDYISDLPDECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLS 94


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = -1

Query: 219 QSSSVHAVQVFQTQAP--PLNLKHFLNAGDDLISKLPEDCLGLIFQSLSSGDRKSCSLVC 46
           +S S   +   QT+ P    ++   +N   D IS LP++CL  IFQSLS  DR+ CSLVC
Sbjct: 21  KSKSTALISPMQTEEPNDKDDVVLIINESPDYISDLPDECLACIFQSLSPSDRQRCSLVC 80

Query: 45  KRWFAIEAQSRQRLN 1
           +RW  IE QSR RL+
Sbjct: 81  RRWLRIEGQSRHRLS 95


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = -1

Query: 135 DLISKLPEDCLGLIFQSLSSGDRKSCSLVCKRWFAIEAQSRQRLN 1
           D IS LP++CL  IFQSL SGDRK CSLVC+RW  IE Q+R RL+
Sbjct: 52  DYISDLPDECLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLS 96


Top