BLASTX nr result

ID: Angelica22_contig00029881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029881
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   214   6e-54
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...   181   1e-44
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   179   2e-43
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ...   179   3e-43
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob...   176   2e-42

>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 127

 Score =  214 bits (545), Expect = 6e-54
 Identities = 109/121 (90%), Positives = 113/121 (93%)
 Frame = +3

Query: 45  VEKGRGFSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNFSTITPKKPNSALRK 224
           +E+GR FSN  KDPMTSKELNEEPYEV+IS T L SG KGDLSVNFSTITPKKPNSALRK
Sbjct: 1   MEEGRRFSNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRK 60

Query: 225 VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQ 404
           VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQ
Sbjct: 61  VARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQ 120

Query: 405 Q 407
           Q
Sbjct: 121 Q 121


>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score =  181 bits (460), Expect(2) = 1e-44
 Identities = 95/114 (83%), Positives = 101/114 (88%)
 Frame = +3

Query: 3   ENVTKLVLVTLQDGVEKGRGFSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNF 182
           ENVT+LV VTL+DG+E+GR FSN  KDPMTSKELNEEPYEVKIS T L SGSKGDLSVNF
Sbjct: 3   ENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKISRTVLSSGSKGDLSVNF 62

Query: 183 STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLP 344
           STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVV V G  ++  P
Sbjct: 63  STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVFVGGEGLRIYP 116



 Score = 23.1 bits (48), Expect(2) = 1e-44
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 322 GEGLRIYPV 348
           GEGLRIYPV
Sbjct: 109 GEGLRIYPV 117


>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
           gi|355488626|gb|AES69829.1| NAD(P)H-quinone
           oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  179 bits (455), Expect = 2e-43
 Identities = 95/115 (82%), Positives = 97/115 (84%)
 Frame = +3

Query: 63  FSNA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRL 242
           FSN  KDP+TSKELNE+               K DLSVNFSTITPKKPNSALRKVARVRL
Sbjct: 62  FSNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRL 106

Query: 243 TSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 407
           TSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 107 TSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 161


>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
           gi|350996572|gb|AEQ37083.1| ribosomal protein S12
           [Datura stramonium]
          Length = 137

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/95 (95%), Positives = 91/95 (95%)
 Frame = +3

Query: 123 VKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 302
           V ISCT L SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEH
Sbjct: 37  VYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEH 96

Query: 303 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 407
           SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 97  SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 131


>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
           gi|350996664|gb|AEQ37174.1| ribosomal protein S12
           (chloroplast) [Ginkgo biloba]
          Length = 141

 Score =  176 bits (445), Expect = 2e-42
 Identities = 89/95 (93%), Positives = 90/95 (94%)
 Frame = +3

Query: 123 VKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 302
           V ISCT L SG KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH
Sbjct: 37  VYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEH 96

Query: 303 SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 407
           SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ
Sbjct: 97  SVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQ 131


Top