BLASTX nr result

ID: Angelica22_contig00029749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029749
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   152   3e-35
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   152   3e-35
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   133   1e-29
ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
gb|ABK92530.1| unknown [Populus trichocarpa]                          132   3e-29

>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  152 bits (384), Expect = 3e-35
 Identities = 84/176 (47%), Positives = 109/176 (61%), Gaps = 13/176 (7%)
 Frame = -1

Query: 538 RKFGSKTRIHKWVSGQITYKRLYKTLCELEGLIGFWRRSGDRNKNCGNVDDFTPALVYFQ 359
           R++GSKT+I KW SG+ITY+ LY+TL E E LIGFWRRSG            +P L++F+
Sbjct: 61  RRWGSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVA-----SPPLIFFE 115

Query: 358 WGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEGECVNFLDPNCKVEVFDDLVKKCDDL 179
           W    + GSRVSPS+ G Y V+K P   + +  EGE +NFLDP+ K+E  +D V      
Sbjct: 116 WCPSFIIGSRVSPSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAV-QA 174

Query: 178 RFVENELIPVNVSFMGKCHVVVEENLNYVS-------------SGYSGEVRKSGVG 50
            F+EN+LIPV+VSFMGK HVVVEENL++ S             S  SG VR   +G
Sbjct: 175 GFLENDLIPVHVSFMGKNHVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIG 230


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  152 bits (384), Expect = 3e-35
 Identities = 84/176 (47%), Positives = 109/176 (61%), Gaps = 13/176 (7%)
 Frame = -1

Query: 538 RKFGSKTRIHKWVSGQITYKRLYKTLCELEGLIGFWRRSGDRNKNCGNVDDFTPALVYFQ 359
           R++GSKT+I KW SG+ITY+ LY+TL E E LIGFWRRSG            +P L++F+
Sbjct: 61  RRWGSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVA-----SPPLIFFE 115

Query: 358 WGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEGECVNFLDPNCKVEVFDDLVKKCDDL 179
           W    + GSRVSPS+ G Y V+K P   + +  EGE +NFLDP+ K+E  +D V      
Sbjct: 116 WCPSFIIGSRVSPSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAV-QA 174

Query: 178 RFVENELIPVNVSFMGKCHVVVEENLNYVS-------------SGYSGEVRKSGVG 50
            F+EN+LIPV+VSFMGK HVVVEENL++ S             S  SG VR   +G
Sbjct: 175 GFLENDLIPVHVSFMGKNHVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIG 230


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  133 bits (335), Expect = 1e-29
 Identities = 69/148 (46%), Positives = 96/148 (64%)
 Frame = -1

Query: 538 RKFGSKTRIHKWVSGQITYKRLYKTLCELEGLIGFWRRSGDRNKNCGNVDDFTPALVYFQ 359
           RK+GSKT+I  W  G+ITY+ LYKTL + E LIGFWRRSG        +   +P LV+F+
Sbjct: 63  RKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSGS-----STISVTSPPLVFFE 117

Query: 358 WGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEGECVNFLDPNCKVEVFDDLVKKCDDL 179
           WG   + G RVSPSKNG Y V K P  W+ L+SEG+ ++F++ + + E F        + 
Sbjct: 118 WGPDFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEGQAMSFINLDGRSE-FAGKFADLGES 176

Query: 178 RFVENELIPVNVSFMGKCHVVVEENLNY 95
            F + +LIP+++SFMGK H V+EENL +
Sbjct: 177 DFSDCDLIPIDLSFMGKNHFVIEENLAF 204


>ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|222842872|gb|EEE80419.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  132 bits (333), Expect = 3e-29
 Identities = 72/169 (42%), Positives = 105/169 (62%)
 Frame = -1

Query: 538 RKFGSKTRIHKWVSGQITYKRLYKTLCELEGLIGFWRRSGDRNKNCGNVDDFTPALVYFQ 359
           R++GSKT+I+KW +GQI+YK LYKTL + E LIGFWRR G   +         P+LV+F+
Sbjct: 56  RRWGSKTQINKWGNGQISYKLLYKTLNKWENLIGFWRRCGQSQQ---KETVKPPSLVFFE 112

Query: 358 WGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEGECVNFLDPNCKVEVFDDLVKKCDDL 179
           WG   ++G RVSPS+N  Y V+K P  WI ++ EGE VN+LDP  +     +  K   +L
Sbjct: 113 WGSSFLSGWRVSPSQN-AYSVIKSPFLWISISPEGEIVNYLDPEGQ-----NKNKLFGEL 166

Query: 178 RFVENELIPVNVSFMGKCHVVVEENLNYVSSGYSGEVRKSGVGKEGNSE 32
            +++ +++PVNV+F+G  H  VEEN+N+    Y   +    +  E N E
Sbjct: 167 GYLDMDVVPVNVNFIGDSHFSVEENVNF---AYRRSLSSGNLKGEDNGE 212


>gb|ABK92530.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  132 bits (333), Expect = 3e-29
 Identities = 72/169 (42%), Positives = 105/169 (62%)
 Frame = -1

Query: 538 RKFGSKTRIHKWVSGQITYKRLYKTLCELEGLIGFWRRSGDRNKNCGNVDDFTPALVYFQ 359
           R++GSKT+I+KW +GQI+YK LYKTL + E LIGFWRR G   +         P+LV+F+
Sbjct: 56  RRWGSKTQINKWGNGQISYKLLYKTLNKWENLIGFWRRCGQSQQ---KETVKPPSLVFFE 112

Query: 358 WGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEGECVNFLDPNCKVEVFDDLVKKCDDL 179
           WG   ++G RVSPS+N  Y V+K P  WI ++ EGE VN+LDP  +     +  K   +L
Sbjct: 113 WGSSFLSGWRVSPSQN-AYSVIKSPFLWISISPEGEIVNYLDPEGQ-----NKNKLFGEL 166

Query: 178 RFVENELIPVNVSFMGKCHVVVEENLNYVSSGYSGEVRKSGVGKEGNSE 32
            +++ +++PVNV+F+G  H  VEEN+N+    Y   +    +  E N E
Sbjct: 167 GYLDMDVVPVNVNFIGDSHFSVEENVNF---AYRRSLSSGNLKGEDNGE 212


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