BLASTX nr result

ID: Angelica22_contig00029665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029665
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    157   7e-37
gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]             157   7e-37
gb|AAF24531.1|AC007534_12 F7F22.17 [Arabidopsis thaliana]             148   4e-34
gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]             148   4e-34
pir||C84500 probable retroelement pol polyprotein [imported] - A...   146   2e-33

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  157 bits (398), Expect = 7e-37
 Identities = 74/98 (75%), Positives = 84/98 (85%)
 Frame = -3

Query: 295  GHAGFYRRFIKDFSKKARPLTTLLGKDVKFEFNNDCFQSFEHLKKELTSAPIIKSPDWSE 116
            GHAGFYRRFIKDFSK ARPLT LL KD  F F+ DC ++FE+LKKELT+APII +PDW+ 
Sbjct: 1087 GHAGFYRRFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTTAPIIHAPDWTL 1146

Query: 115  PFELMCDASDYAVGAVLGQRINKMPHVIYYASKTLNDA 2
            PFELMCDASD A+GAVLGQR +  PHVIYYAS+TLNDA
Sbjct: 1147 PFELMCDASDSAIGAVLGQRFDGKPHVIYYASRTLNDA 1184


>gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]
          Length = 680

 Score =  157 bits (398), Expect = 7e-37
 Identities = 74/98 (75%), Positives = 84/98 (85%)
 Frame = -3

Query: 295 GHAGFYRRFIKDFSKKARPLTTLLGKDVKFEFNNDCFQSFEHLKKELTSAPIIKSPDWSE 116
           GHAGFYRRFIKDFSK ARPLT LL KD  F F+ DC ++FE+LKKELT+APII +PDW+ 
Sbjct: 392 GHAGFYRRFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLKKELTTAPIIHAPDWTL 451

Query: 115 PFELMCDASDYAVGAVLGQRINKMPHVIYYASKTLNDA 2
           PFELMCDASD A+GAVLGQR +  PHVIYYAS+TLNDA
Sbjct: 452 PFELMCDASDSAIGAVLGQRFDGKPHVIYYASRTLNDA 489


>gb|AAF24531.1|AC007534_12 F7F22.17 [Arabidopsis thaliana]
          Length = 1799

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/98 (68%), Positives = 85/98 (86%)
 Frame = -3

Query: 295  GHAGFYRRFIKDFSKKARPLTTLLGKDVKFEFNNDCFQSFEHLKKELTSAPIIKSPDWSE 116
            GHAGFYRRFIKDFSK ARPLT LL K+ +F+F++DC +SF+ +K  L SAP++++P+W  
Sbjct: 1197 GHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNWDY 1256

Query: 115  PFELMCDASDYAVGAVLGQRINKMPHVIYYASKTLNDA 2
            PFE+MCDASDYAVGAVLGQ+I+K  HVIYYAS+TL+DA
Sbjct: 1257 PFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDA 1294


>gb|AAF24529.1|AC007534_10 F7F22.15 [Arabidopsis thaliana]
          Length = 1862

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/98 (68%), Positives = 85/98 (86%)
 Frame = -3

Query: 295  GHAGFYRRFIKDFSKKARPLTTLLGKDVKFEFNNDCFQSFEHLKKELTSAPIIKSPDWSE 116
            GHAGFYRRFIKDFSK ARPLT LL K+ +F+F++DC +SF+ +K  L SAP++++P+W  
Sbjct: 1211 GHAGFYRRFIKDFSKIARPLTRLLCKETEFKFDDDCLKSFQTIKDALVSAPVVRAPNWDY 1270

Query: 115  PFELMCDASDYAVGAVLGQRINKMPHVIYYASKTLNDA 2
            PFE+MCDASDYAVGAVLGQ+I+K  HVIYYAS+TL+DA
Sbjct: 1271 PFEIMCDASDYAVGAVLGQKIDKKLHVIYYASRTLDDA 1308


>pir||C84500 probable retroelement pol polyprotein [imported] - Arabidopsis
           thaliana
          Length = 976

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/98 (69%), Positives = 82/98 (83%)
 Frame = -3

Query: 295 GHAGFYRRFIKDFSKKARPLTTLLGKDVKFEFNNDCFQSFEHLKKELTSAPIIKSPDWSE 116
           GHAGFYRRFIKDFSK ARPLT+LL K+VKFEF  +C  +F+ +K+ L SAPI++ PDW  
Sbjct: 180 GHAGFYRRFIKDFSKIARPLTSLLCKEVKFEFTQECHDAFQQIKQALISAPIVQPPDWDL 239

Query: 115 PFELMCDASDYAVGAVLGQRINKMPHVIYYASKTLNDA 2
           PFE+MCDASD+AVGAVLGQR +K  H IYYAS+TL+DA
Sbjct: 240 PFEVMCDASDFAVGAVLGQRKDKKLHAIYYASRTLDDA 277


Top