BLASTX nr result

ID: Angelica22_contig00029523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029523
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    93   2e-17
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops...    84   9e-15
dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]         84   9e-15

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/67 (68%), Positives = 53/67 (79%)
 Frame = +1

Query: 70  MFYSHQSLSKKGALGTVWVAAHSHKKLNKEDVSNTNISSSVDKILLDEVPVVTYRILAYL 249
           MFYSH  LS+KG LG +WVAA+  KKL K  V+ T+I+SSVDKIL DE   VTYR+LAYL
Sbjct: 1   MFYSHSFLSRKGPLGAIWVAAYCFKKLKKAQVTQTDIASSVDKILQDEFDAVTYRVLAYL 60

Query: 250 LLGVVRI 270
           LLGVVRI
Sbjct: 61  LLGVVRI 67


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = +1

Query: 70  MFYSHQSLSKKGALGTVWVAAHSHKKLNKEDVSNTNISSSVDKILLDEVPVVTYRILAYL 249
           MF S   LS+KGAL +VW AA+ HKKL K  V+ TNISSSVDKIL+DEVPV+ YRIL Y+
Sbjct: 1   MFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISSSVDKILVDEVPVLAYRILGYI 60

Query: 250 LLGVVRI 270
           LLGVVRI
Sbjct: 61  LLGVVRI 67


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +1

Query: 70  MFYSHQSLSKKGALGTVWVAAHSHKKLNKEDVSNTNISSSVDKILLDEVPVVTYRILAYL 249
           MFYSH  LS+KG LG++WVAA+  K+L K  V++T+ISSSVDKIL D   VVTYR+LAYL
Sbjct: 1   MFYSHCLLSRKGPLGSIWVAAYYFKRLKKAQVTSTDISSSVDKILQDGFDVVTYRVLAYL 60

Query: 250 LLGVVRI 270
           LLGVVRI
Sbjct: 61  LLGVVRI 67


>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
          Length = 809

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +1

Query: 70  MFYSHQSLSKKGALGTVWVAAHSHKKLNKEDVSNTNISSSVDKILLDEVPVVTYRILAYL 249
           MFYSH  +S+KG LG +WVAA+  KKL K  V  T+I SSVD+IL  E+  +TYR+LAYL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 250 LLGVVRI 270
           LLGVVRI
Sbjct: 61  LLGVVRI 67


>dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]
          Length = 901

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +1

Query: 70  MFYSHQSLSKKGALGTVWVAAHSHKKLNKEDVSNTNISSSVDKILLDEVPVVTYRILAYL 249
           MFYSH  +S+KG LG +WVAA+  KKL K  V  T+I SSVD+IL  E+  +TYR+LAYL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 250 LLGVVRI 270
           LLGVVRI
Sbjct: 61  LLGVVRI 67


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