BLASTX nr result
ID: Angelica22_contig00029455
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00029455
(700 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [... 177 2e-42
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 174 1e-41
ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containin... 169 5e-40
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 165 9e-39
ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containin... 163 3e-38
>ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355518206|gb|AES99829.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 422
Score = 177 bits (449), Expect = 2e-42
Identities = 79/131 (60%), Positives = 101/131 (77%)
Frame = +2
Query: 308 MPDNRQAKRNVGVPNTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSIYPDRPGEPDCIYFL 487
MP+NRQ +N G N S D+I+EA+R+L++ S+ D + S YPDRPGEPDC+Y+L
Sbjct: 1 MPENRQVFKNAG-SNPSGDNIEEAIRRLKINSTRDRD--AVPQSMPYPDRPGEPDCVYYL 57
Query: 488 RTGLCGYGATCRFNHPSKLPSQIGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRL 667
RTG+CGYG+ CR+NHP+ + S + QYG ELP+R+GQPDCEYFLKTG CKYGS+CKYHH
Sbjct: 58 RTGMCGYGSNCRYNHPANI-SPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPK 116
Query: 668 DRNGAGPVILN 700
DR GA PV+ N
Sbjct: 117 DRRGAAPVVFN 127
Score = 77.4 bits (189), Expect = 3e-12
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 401 SSEKEDGNSGDDSSIYPDRPGEPDCIYFLRTGLCGYGATCRFNHPSKLPSQ---IGQYGG 571
+ E G +SS+ PDRP +PDC YF+ TG C YG+ C+F+HP + +Q I G
Sbjct: 256 AGETLSGGQAMNSSL-PDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLG- 313
Query: 572 ELPQRIGQPDCEYFLKTGMCKYGSSCKYHH 661
LP R G C Y+ G+CK+G +CK+ H
Sbjct: 314 -LPMRPGNAICSYYRIYGVCKFGPTCKFDH 342
Score = 57.0 bits (136), Expect = 4e-06
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 491 TGLCGYGATCRFNHPSKLPSQIGQ-YGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRL 667
TG G + +P+ GQ LP R QPDC+YF+ TG CKYGS CK+HH
Sbjct: 241 TGFIGSNLVYDYMNPAGETLSGGQAMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPK 300
Query: 668 DR 673
+R
Sbjct: 301 ER 302
>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
product [Vitis vinifera]
Length = 450
Score = 174 bits (442), Expect = 1e-41
Identities = 83/131 (63%), Positives = 103/131 (78%)
Frame = +2
Query: 308 MPDNRQAKRNVGVPNTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSIYPDRPGEPDCIYFL 487
M DNRQ + N GV N S ++++EA+ +L++ ++ E+G+ G SS YPDRPGEPDCIY+L
Sbjct: 1 MLDNRQVQSN-GVSNPSSENVEEAILRLKIHDNQ-EEGSVGH-SSPYPDRPGEPDCIYYL 57
Query: 488 RTGLCGYGATCRFNHPSKLPSQIGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRL 667
RTGLCGYG+ CRFNHP+ Q QY GELP+R+GQPDC YFLKTG CKYGS+CKYHH
Sbjct: 58 RTGLCGYGSNCRFNHPA-YSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPR 116
Query: 668 DRNGAGPVILN 700
DR+GAGPV LN
Sbjct: 117 DRHGAGPVSLN 127
Score = 75.5 bits (184), Expect = 1e-11
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 11/99 (11%)
Frame = +2
Query: 404 SEKEDGNSGDDSSI------YPDRPGEPDCIYFLRTGLCGYGATCRFNHPSKLPSQ---- 553
++ E G+SG + P+RP +P+C YF+ TG C YG+ C+++HP + +Q
Sbjct: 261 NQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATN 320
Query: 554 -IGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRL 667
+G G LP R GQ C ++ G+CKYG +CK+ H L
Sbjct: 321 TLGPLG--LPLRPGQAVCSHYNLYGLCKYGPTCKFDHPL 357
Score = 55.8 bits (133), Expect = 8e-06
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 575 LPQRIGQPDCEYFLKTGMCKYGSSCKYHHRLDR 673
LP+R QP+C YF+ TG CKYGS CKYHH +R
Sbjct: 281 LPERPDQPECRYFMSTGSCKYGSDCKYHHPKER 313
>ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus] gi|449515163|ref|XP_004164619.1|
PREDICTED: zinc finger CCCH domain-containing protein
3-like [Cucumis sativus]
Length = 430
Score = 169 bits (428), Expect = 5e-40
Identities = 82/131 (62%), Positives = 95/131 (72%)
Frame = +2
Query: 308 MPDNRQAKRNVGVPNTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSIYPDRPGEPDCIYFL 487
MPDN Q +RN VPN S D I EA+ +L + S+ +DG +SS YPDRPGEPDC+Y++
Sbjct: 1 MPDNLQVQRN-DVPNQSPD-ISEALWRLEI--SDNQDGGDAAESSPYPDRPGEPDCLYYM 56
Query: 488 RTGLCGYGATCRFNHPSKLPSQIGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRL 667
RTG C YG+ CRFNHP + Q Y GELP+RIGQPDCEYFLKTG CKYG SCKYHH
Sbjct: 57 RTGSCSYGSNCRFNHPVYV-GQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPR 115
Query: 668 DRNGAGPVILN 700
DR GAGPV N
Sbjct: 116 DRRGAGPVTFN 126
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Frame = +2
Query: 350 NTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSI------YPDRPGEPDCIYFLRTGLCGYG 511
NT V ++ + L + ED S ++ PDRP +P+C YF+ G C YG
Sbjct: 231 NTYVSNVNPILPNLGYNNINLEDSYSNGQLALSTSTPTLPDRPDQPECRYFMNNGTCKYG 290
Query: 512 ATCRFNHPSKLPSQIGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHH 661
+ C+F+HP + +Q LP R GQ C Y+ G+CKYG SCK+ H
Sbjct: 291 SDCKFHHPKQRIAQSATNALGLPSRPGQAICSYYNMYGLCKYGPSCKFDH 340
>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein,
putative [Ricinus communis]
Length = 456
Score = 165 bits (417), Expect = 9e-39
Identities = 77/128 (60%), Positives = 96/128 (75%)
Frame = +2
Query: 317 NRQAKRNVGVPNTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSIYPDRPGEPDCIYFLRTG 496
NRQ K N V N S D+I+EA+ +L++ ++++ G + SS YPDRPGEPDC+Y+LRTG
Sbjct: 11 NRQVKSNA-VSNQSPDNIEEAIWRLKIHDNQEQGGMA--PSSPYPDRPGEPDCVYYLRTG 67
Query: 497 LCGYGATCRFNHPSKLPSQIGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHRLDRN 676
LCGYG CRFNHP +Q Q+ ELP+R+GQPDC Y+LKTG CKYGS+CKYHH DRN
Sbjct: 68 LCGYGNNCRFNHPP-YAAQGNQFKEELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRN 126
Query: 677 GAGPVILN 700
GAGPV N
Sbjct: 127 GAGPVSFN 134
Score = 79.7 bits (195), Expect = 5e-13
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
Frame = +2
Query: 404 SEKEDGNSGD------DSSIYPDRPGEPDCIYFLRTGLCGYGATCRFNHPSKLPSQ---- 553
++ E G+SG SS P+RP +P+C YF+ TG C YG+ C+++HP + +Q
Sbjct: 268 NQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATN 327
Query: 554 -IGQYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHH 661
IG G LP R GQP C + G+CK+G +C++ H
Sbjct: 328 SIGPVG--LPSRPGQPICSNYSMYGLCKFGPTCRFDH 362
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Frame = +2
Query: 575 LPQRIGQPDCEYFLKTGMCKYGSSCKYHHRLDR------NGAGPV 691
LP+R QP+C YF+ TG CKYGS CKYHH +R N GPV
Sbjct: 288 LPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPV 332
>ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 417
Score = 163 bits (413), Expect = 3e-38
Identities = 77/132 (58%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Frame = +2
Query: 308 MPDNRQAKRNVGVPNTSVDHIQEAVRKLRVQSSEKEDGNSGDDSSIYPDRPGEPDCIYFL 487
MP+NRQ RN S D+I+EA+R+L++ ++ D ++ S+ YPDRPGEP+C+Y+L
Sbjct: 1 MPENRQVLRNAD----SSDNIEEAIRRLKI--NDNWDRDAAAQSTQYPDRPGEPECLYYL 54
Query: 488 RTGLCGYGATCRFNHPSKLPSQIG-QYGGELPQRIGQPDCEYFLKTGMCKYGSSCKYHHR 664
RTG CGYG+ CR++HP+ + IG YG ELPQR GQPDCEYFLKTGMCKYGS+CKYHH
Sbjct: 55 RTGACGYGSNCRYHHPAHI--SIGTHYGEELPQRAGQPDCEYFLKTGMCKYGSTCKYHHP 112
Query: 665 LDRNGAGPVILN 700
DR GA PV N
Sbjct: 113 KDRRGAAPVSFN 124
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Frame = +2
Query: 437 SSIYPDRPGEPDCIYFLRTGLCGYGATCRFNHPSKLPSQ--IGQYGGELPQRIGQPDCEY 610
+S P+RP +P+C YF+ TG C YG+ C+F+HP + SQ I G LP R GQ C Y
Sbjct: 265 NSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERISQSLINPLG--LPVRPGQAVCSY 322
Query: 611 FLKTGMCKYGSSCKYHH 661
+ GMCK+G +CK+ H
Sbjct: 323 YRIYGMCKFGPTCKFDH 339