BLASTX nr result
ID: Angelica22_contig00029440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00029440
(767 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002884032.1| pentatricopeptide repeat-containing protein ... 168 3e-62
ref|NP_849962.1| pentatricopeptide repeat-containing protein [Ar... 169 6e-62
ref|NP_565402.1| pentatricopeptide repeat-containing protein [Ar... 169 6e-62
dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana] 169 6e-62
ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi... 157 7e-60
>ref|XP_002884032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329872|gb|EFH60291.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 504
Score = 168 bits (426), Expect(2) = 3e-62
Identities = 86/138 (62%), Positives = 108/138 (78%)
Frame = +1
Query: 4 KMDTVCFNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPK 183
K+DTVC NMVLSS GAH L +M SWLQ++K NVP SIRTYN+VLNSCP+IMS+L+D
Sbjct: 310 KIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIMSLLKDLN 369
Query: 184 SIPLSLNELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQW 363
S P+SL+EL L ++E++LV EL S+VL EA+ W ++E KLDLHGMHLSS+YLI+LQW
Sbjct: 370 SCPVSLSELRTFLNEDEALLVLELTQSTVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQW 429
Query: 364 FDELRTRFELVETDIPAE 417
DE+R RF + IPAE
Sbjct: 430 MDEIRLRFRDQKCVIPAE 447
Score = 97.1 bits (240), Expect(2) = 3e-62
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = +2
Query: 488 IPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 667
IPAE+ ++ GSGKHS VRG+SPVK LVK++MVRTESP+RIDRKN+G FIAKGK K WLC
Sbjct: 444 IPAEIVVVSGSGKHSNVRGESPVKALVKKIMVRTESPMRIDRKNVGSFIAKGKNVKEWLC 503
>ref|NP_849962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75244359|sp|Q8GWA9.1|PP157_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17033 gi|26452937|dbj|BAC43545.1| unknown protein
[Arabidopsis thaliana] gi|330251482|gb|AEC06576.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 505
Score = 169 bits (427), Expect(2) = 6e-62
Identities = 87/138 (63%), Positives = 107/138 (77%)
Frame = +1
Query: 4 KMDTVCFNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPK 183
K+DTVC NMVLSS GAH L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D
Sbjct: 311 KIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLD 370
Query: 184 SIPLSLNELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQW 363
S P+SL+EL L ++E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW
Sbjct: 371 SCPVSLSELRTFLNEDEALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQW 430
Query: 364 FDELRTRFELVETDIPAE 417
DE R RF + IPAE
Sbjct: 431 MDETRLRFSEEKCVIPAE 448
Score = 95.5 bits (236), Expect(2) = 6e-62
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 488 IPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 667
IPAE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 445 IPAEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504
>ref|NP_565402.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|13877877|gb|AAK44016.1|AF370201_1 unknown protein
[Arabidopsis thaliana] gi|21280879|gb|AAM44931.1|
unknown protein [Arabidopsis thaliana]
gi|330251481|gb|AEC06575.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 169 bits (427), Expect(2) = 6e-62
Identities = 87/138 (63%), Positives = 107/138 (77%)
Frame = +1
Query: 4 KMDTVCFNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPK 183
K+DTVC NMVLSS GAH L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D
Sbjct: 310 KIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLD 369
Query: 184 SIPLSLNELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQW 363
S P+SL+EL L ++E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW
Sbjct: 370 SCPVSLSELRTFLNEDEALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQW 429
Query: 364 FDELRTRFELVETDIPAE 417
DE R RF + IPAE
Sbjct: 430 MDETRLRFSEEKCVIPAE 447
Score = 95.5 bits (236), Expect(2) = 6e-62
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 488 IPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 667
IPAE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 444 IPAEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 503
>dbj|BAF01049.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 169 bits (427), Expect(2) = 6e-62
Identities = 87/138 (63%), Positives = 107/138 (77%)
Frame = +1
Query: 4 KMDTVCFNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPK 183
K+DTVC NMVLSS GAH L +M SWLQ++K NVP SIRTYN+VLNSCP+I+SML+D
Sbjct: 307 KIDTVCSNMVLSSYGAHDALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLD 366
Query: 184 SIPLSLNELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQW 363
S P+SL+EL L ++E++LV EL SSVL EA+ W ++E KLDLHGMHLSS+YLI+LQW
Sbjct: 367 SCPVSLSELRTFLNEDEALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQW 426
Query: 364 FDELRTRFELVETDIPAE 417
DE R RF + IPAE
Sbjct: 427 MDETRLRFSEEKCVIPAE 444
Score = 95.5 bits (236), Expect(2) = 6e-62
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +2
Query: 488 IPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 667
IPAE+ ++ GSGKHS VRG+SPVK LVK++MVRT SP+RIDRKN+G FIAKGK K WLC
Sbjct: 441 IPAEIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 500
>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
[Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
protein product [Vitis vinifera]
Length = 435
Score = 157 bits (398), Expect(2) = 7e-60
Identities = 82/138 (59%), Positives = 102/138 (73%)
Frame = +1
Query: 4 KMDTVCFNMVLSSLGAHAELLEMVSWLQRMKYLNVPLSIRTYNTVLNSCPSIMSMLQDPK 183
++DTV NMVLSS GA+ + EMVSWLQRMK ++P SIRTYN+VLNSCP IMS+LQD K
Sbjct: 242 ELDTVVSNMVLSSYGAYNKQSEMVSWLQRMKNSSIPFSIRTYNSVLNSCPMIMSILQDLK 301
Query: 184 SIPLSLNELLADLCDNESMLVQELIVSSVLVEAMGWTSLELKLDLHGMHLSSAYLIILQW 363
+ P +++EL+ L +E++LV+ELI S VL E M W E KLDLHGMHL SAYLI+LQW
Sbjct: 302 TFPPTIDELMETLKGDEALLVKELIGSMVLAELMEWDCSEGKLDLHGMHLGSAYLIMLQW 361
Query: 364 FDELRTRFELVETDIPAE 417
+ELR R E +P E
Sbjct: 362 REELRYRLNAAEYVMPVE 379
Score = 99.8 bits (247), Expect(2) = 7e-60
Identities = 40/60 (66%), Positives = 53/60 (88%)
Frame = +2
Query: 488 IPAEVRIICGSGKHSTVRGDSPVKHLVKELMVRTESPLRIDRKNIGCFIAKGKVCKSWLC 667
+P E+ ++CGSGKHS+VRG+SPVK +V+E+M RT SP++IDRKNIGCF+AK KV K+WLC
Sbjct: 376 MPVEITVVCGSGKHSSVRGESPVKRMVREMMTRTRSPMKIDRKNIGCFVAKAKVVKNWLC 435