BLASTX nr result

ID: Angelica22_contig00029351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029351
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]    67   2e-09
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...    65   5e-09
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...    64   1e-08
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CBI38715.3| unnamed protein product [Vitis vinifera]               61   1e-07

>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/65 (46%), Positives = 47/65 (72%)
 Frame = -2

Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQ 361
           GEA H  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEEY+ R ++
Sbjct: 358 GEAXHTETWVAIIPRICEV-DKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVR 416

Query: 360 TRRKK 346
            + +K
Sbjct: 417 DKSRK 421


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 30/65 (46%), Positives = 49/65 (75%)
 Frame = -2

Query: 537 EAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQT 358
           EAPH +TW  IV ++C  +D V +++ +L+E+LK+EIK  T+IV+AG GLE+Y+ R I+ 
Sbjct: 388 EAPHKDTWMIIVPQICEVDDGV-KIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRA 446

Query: 357 RRKKF 343
           + ++F
Sbjct: 447 KSRQF 451


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/55 (52%), Positives = 42/55 (76%)
 Frame = -2

Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYI 376
           GEAPH  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEEY+
Sbjct: 315 GEAPHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEEYM 368


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 29/66 (43%), Positives = 46/66 (69%)
 Frame = -2

Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQ 361
           GEAPH  TW  +V+R+C  +D + R+ ++L ++ KVE+K  T+IVEAG GLEEY+ +  Q
Sbjct: 411 GEAPHTETWVMMVSRICEVDD-LQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKRTQ 469

Query: 360 TRRKKF 343
            +  ++
Sbjct: 470 QKAWRY 475


>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/53 (52%), Positives = 40/53 (75%)
 Frame = -2

Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEE 382
           GEAPH  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEE
Sbjct: 331 GEAPHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEE 382


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