BLASTX nr result
ID: Angelica22_contig00029351
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00029351 (541 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera] 67 2e-09 ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ... 65 5e-09 ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 64 1e-08 ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 emb|CBI38715.3| unnamed protein product [Vitis vinifera] 61 1e-07 >emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera] Length = 422 Score = 66.6 bits (161), Expect = 2e-09 Identities = 30/65 (46%), Positives = 47/65 (72%) Frame = -2 Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQ 361 GEA H TW I+ R+C D+++R+E++ E LK+EI P+T++VEAG GLEEY+ R ++ Sbjct: 358 GEAXHTETWVAIIPRICEV-DKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVR 416 Query: 360 TRRKK 346 + +K Sbjct: 417 DKSRK 421 >ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula] gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 451 Score = 65.5 bits (158), Expect = 5e-09 Identities = 30/65 (46%), Positives = 49/65 (75%) Frame = -2 Query: 537 EAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQT 358 EAPH +TW IV ++C +D V +++ +L+E+LK+EIK T+IV+AG GLE+Y+ R I+ Sbjct: 388 EAPHKDTWMIIVPQICEVDDGV-KIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRA 446 Query: 357 RRKKF 343 + ++F Sbjct: 447 KSRQF 451 >ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis vinifera] Length = 1105 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = -2 Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYI 376 GEAPH TW I+ R+C D+++R+E++ E LK+EI P+T++VEAG GLEEY+ Sbjct: 315 GEAPHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEEYM 368 >ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa] Length = 475 Score = 62.0 bits (149), Expect = 6e-08 Identities = 29/66 (43%), Positives = 46/66 (69%) Frame = -2 Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQ 361 GEAPH TW +V+R+C +D + R+ ++L ++ KVE+K T+IVEAG GLEEY+ + Q Sbjct: 411 GEAPHTETWVMMVSRICEVDD-LQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKRTQ 469 Query: 360 TRRKKF 343 + ++ Sbjct: 470 QKAWRY 475 >emb|CBI38715.3| unnamed protein product [Vitis vinifera] Length = 429 Score = 60.8 bits (146), Expect = 1e-07 Identities = 28/53 (52%), Positives = 40/53 (75%) Frame = -2 Query: 540 GEAPHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEE 382 GEAPH TW I+ R+C D+++R+E++ E LK+EI P+T++VEAG GLEE Sbjct: 331 GEAPHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEE 382