BLASTX nr result

ID: Angelica22_contig00029276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029276
         (1458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|1...    68   7e-09
ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, put...    66   3e-08
ref|XP_003546151.1| PREDICTED: ATP synthase gamma chain, chlorop...    65   3e-08
gb|ACU20328.1| unknown [Glycine max]                                   65   3e-08
sp|P29790.1|ATPG_TOBAC RecName: Full=ATP synthase gamma chain, c...    64   1e-07

>ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|118489494|gb|ABK96549.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848536|gb|EEE86083.1| predicted protein [Populus
           trichocarpa]
          Length = 375

 Score = 67.8 bits (164), Expect = 7e-09
 Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
 Frame = +2

Query: 548 LTFSSCLNLLKLSAIDTTSNPTFRSSPTKTH*NLHELPDHVGSVT---KITEAKTVVGAT 718
           L+F S LN  +L +    +NP+  +S T  H  L EL   + SV    KITEA  +V A 
Sbjct: 22  LSFRSSLNPFQLPSSPAANNPSRSTSVTPIHCGLRELRTRIQSVKNTQKITEAMKLVAAA 81

Query: 719 KVGRA*EAVVNVRPF----YKVLYIINEKLKTEDNSNPSIRVFQVE 844
           KV RA EAVVN RPF     +VLY INE+L+T+D   P  +V  V+
Sbjct: 82  KVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVDAPLTKVRPVK 127


>ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, putative [Ricinus
           communis] gi|223542322|gb|EEF43864.1| ATP synthase gamma
           chain 2, chloroplast, putative [Ricinus communis]
          Length = 376

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
 Frame = +2

Query: 548 LTFSSCLNLLKLSAIDTTSN-PTFRSSPTKTH*NLHELPDHVGSVT---KITEAKTVVGA 715
           L+F S LN  +L    + SN P+  SS T  H NL +L   + SV    KITEA  +V A
Sbjct: 22  LSFCSSLNPFQLPTHSSGSNSPSRSSSATPIHCNLRDLRTRIDSVKNTQKITEAMKLVAA 81

Query: 716 TKVGRA*EAVVNVRPF----YKVLYIINEKLKTEDNSNP 820
            KV RA EAVVN RPF     +VLY INE+L+TED   P
Sbjct: 82  AKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVP 120


>ref|XP_003546151.1| PREDICTED: ATP synthase gamma chain, chloroplastic [Glycine max]
          Length = 368

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
 Frame = +2

Query: 548 LTFSSCLNLLKLSAIDTTSNPTFRSSPTKTH*NLHELPDHVGSVT---KITEAKTVVGAT 718
           L+F S LN  +L + + TS    RSS T+    L EL   + SV    KITEA  +V A 
Sbjct: 15  LSFRSVLNPFQLPSQNPTSCTPSRSSTTQIQCGLRELRTRIDSVKNTQKITEAMKLVAAA 74

Query: 719 KVGRA*EAVVNVRPF----YKVLYIINEKLKTEDNSNPSIRVFQVE 844
           KV RA EAVVN RPF     +VLY INE+L TED   P  +V  V+
Sbjct: 75  KVRRAQEAVVNGRPFSETLVEVLYNINEQLLTEDVDIPLTKVRPVK 120


>gb|ACU20328.1| unknown [Glycine max]
          Length = 368

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
 Frame = +2

Query: 548 LTFSSCLNLLKLSAIDTTSNPTFRSSPTKTH*NLHELPDHVGSVT---KITEAKTVVGAT 718
           L+F S LN  +L + + TS    RSS T+    L EL   + SV    KITEA  +V A 
Sbjct: 15  LSFRSVLNPFQLPSQNPTSCTPSRSSTTQIQCGLRELRTRIDSVKNTQKITEAMKLVAAA 74

Query: 719 KVGRA*EAVVNVRPF----YKVLYIINEKLKTEDNSNPSIRVFQVE 844
           KV RA EAVVN RPF     +VLY INE+L TED   P  +V  V+
Sbjct: 75  KVRRAQEAVVNGRPFSETLVEVLYNINEQLLTEDVDIPLTKVRPVK 120


>sp|P29790.1|ATPG_TOBAC RecName: Full=ATP synthase gamma chain, chloroplastic; AltName:
           Full=F-ATPase gamma subunit; Flags: Precursor
           gi|19785|emb|CAA45152.1| ATP synthase (gamma subunit)
           [Nicotiana tabacum]
          Length = 377

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
 Frame = +2

Query: 548 LTFSSCLNLLKLSAIDTT--SNPTFRSSPTKTH*NLHELPDHVGSVT---KITEAKTVVG 712
           L+F S ++  +L   +T+  SNP+  SS T  H  L +L D + SV    KITEA  +V 
Sbjct: 22  LSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDLRDRIESVKNTQKITEAMKLVA 81

Query: 713 ATKVGRA*EAVVNVRPF----YKVLYIINEKLKTEDNSNPSIRVFQVE 844
           A KV RA EAVV  RPF     +VLY INE+L+T+D   P  +V  V+
Sbjct: 82  AAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDVPLTKVRPVK 129


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