BLASTX nr result

ID: Angelica22_contig00029196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029196
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...    70   8e-10
gb|AFK48661.1| unknown [Lotus japonicus]                               69   1e-09
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_002311357.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-09
ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containi...    67   4e-09

>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
 Frame = +3

Query: 225 NTIITVFGKMGDSEMM*RSGAKFHDIRIDPDTSTYSIIVVGGYGNK*LYDNDNNKME--- 395
           NTII+VFG MG  +MM +   KF    I+P+T T++I+ +G YG K +YD  ++ ME   
Sbjct: 272 NTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNIL-IGAYGKKRMYDKMSSVMEYMR 330

Query: 396 ----------YNNAIEAFPDVGDTKYME 449
                     YNN IEAF D GD K+ME
Sbjct: 331 KLQFPWTTSTYNNVIEAFADAGDAKHME 358


>gb|AFK48661.1| unknown [Lotus japonicus]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
 Frame = +3

Query: 225 NTIITVFGKMGDSEMM*RSGAKFHDIRIDPDTSTYSIIVVGGYGNK*LYDNDNNKME--- 395
           NT I+VFG MG  +MM +   KF +  I+P+T T++I+ +G YG K +YD  +  ME   
Sbjct: 50  NTTISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL-IGAYGKKRMYDKMSTVMEYMR 108

Query: 396 ----------YNNAIEAFPDVGDTKYME 449
                     YNN IEAF DVGD K ME
Sbjct: 109 KLQFPWTTSTYNNVIEAFTDVGDAKTME 136


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
 Frame = +3

Query: 225 NTIITVFGKMGDSEMM*RSGAKFHDIRIDPDTSTYSIIVVGGYGNK*LYDNDNNKME--- 395
           N I++VFG  G  EMM R   KF +  I+P+T T++I+ +G YG K +YD  ++ ME   
Sbjct: 288 NIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNIL-IGAYGKKRMYDKMSSVMEYMR 346

Query: 396 ----------YNNAIEAFPDVGDTKYME 449
                     YNN IEAF DVGD K ME
Sbjct: 347 KLQFPWTTSTYNNVIEAFADVGDAKNME 374


>ref|XP_002311357.1| predicted protein [Populus trichocarpa] gi|222851177|gb|EEE88724.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
 Frame = +3

Query: 225 NTIITVFGKMGDSEMM*RSGAKFHDIRIDPDTSTYSIIVVGGYGNK*LYDNDNNKME--- 395
           N I++VFG  G  ++M R   KF +  I+P+T T++I+ +G YG K +YDN ++ ME   
Sbjct: 161 NIILSVFGNKGHVDLMERWYEKFRNFGIEPETRTFNIL-IGAYGKKRMYDNMSSVMEYMR 219

Query: 396 ----------YNNAIEAFPDVGDTKYME 449
                     YNN IEAF DVGD K ME
Sbjct: 220 KLQFPWTTSTYNNVIEAFADVGDAKNME 247


>ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
 Frame = +3

Query: 225 NTIITVFGKMGDSEMM*RSGAKFHDIRIDPDTSTYSIIVVGGYGNK*LYDNDNNKME--- 395
           NTII+VFG MG  +M  +   KF    I+P+T T++I+ +G YG K +YD  ++ ME   
Sbjct: 272 NTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNIL-IGAYGKKRMYDKMSSVMEYMR 330

Query: 396 ----------YNNAIEAFPDVGDTKYME 449
                     YNN IEAF D GD K+ME
Sbjct: 331 KLQFPWTTSTYNNVIEAFADAGDAKHME 358


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