BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00029124
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    60   1e-15
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            66   1e-15
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    64   3e-14
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    60   3e-14
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                52   8e-13

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 60.5 bits (145), Expect(2) = 1e-15
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
 Frame = -2

Query: 640  IPKCAFFFWLALKDRLLTKGKLVTFGLNINPICTLCYSSVESVDHLFMDCPYTYLVLRSS 461
            IPK AF FW+A  +RL  + +   +  N   +C +C    E+ DHLF+ C    L+ +  
Sbjct: 1061 IPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQV 1120

Query: 460  PVPIALS--WTSWQSGI-FTQGNEPLIKKMLAHLFISVIVYCIWRERNDRVH------HN 308
                  S  +  W+  I +   N+      L  L +   ++ IW+ERN R+H      H 
Sbjct: 1121 LARFGRSQMFREWKDIIEWMLSNQGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHT 1180

Query: 307  GVAKNVDQLV 278
             + K +D+ +
Sbjct: 1181 AIFKQIDRSI 1190



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 42/166 (25%), Positives = 62/166 (37%), Gaps = 13/166 (7%)
 Frame = -3

Query: 1113 WILWLHDCLFKNKSLWTSNLPSNSPWCVKEILKLRHEAKHHLSYSISRNSTLLMWHDPWI 934
            W+ W H    ++ + W +   S+  W  K IL LR  AK  L  ++     L  W+D W 
Sbjct: 894  WVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWS 953

Query: 933  RNESLISQLD---------HDIISITESFSLAPIRSFIVDGH*SNNGHNHVLAIDLRNIL 781
                LI  +          H+   +TE+ S      +I+    + N     L   L N  
Sbjct: 954  NLGPLIEAIGASGPQLTGIHESAVVTEASSST---GWILPSARTRNASLANLRSTLLNSP 1010

Query: 780  ATVNFSNEDRVSW--NGQSNPNISD--I*HSIRNVGNPPLWVHAVW 655
            A      ED  +W   G S+ + S       +R      LW  AVW
Sbjct: 1011 APSGDRGEDTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVW 1056


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 65.9 bits (159), Expect(2) = 1e-15
 Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
 Frame = -2

Query: 637 PKCAFFFWLALKDRLLTKGKLVTFGLNINPICTLCYSSVESVDHLFMDCPYTYLVLRS-S 461
           PK +   W+A+K+RL T  +++++    +  C LC+  VE+ DHLF  CPY+  V  + +
Sbjct: 323 PKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAEVWSTLT 382

Query: 460 PVPIALSWTS-WQSGIFTQGNEPLIKKM--LAHLFISVIVYCIWRERNDRVHHNGVAKNV 290
              ++  +T+ W++ +    N+ L  ++  L      + ++ +W+ERN R  H  V +  
Sbjct: 383 RKLLSQHFTNRWEAILKLLTNKSLGHEVPFLTRYTFQLTLHSLWKERNGR-RHGEVPQAA 441

Query: 289 DQLVFLVKRMVRERVYSIK 233
            Q+V  + + VR R+ SI+
Sbjct: 442 AQMVRFLDKQVRNRISSIQ 460



 Score = 44.3 bits (103), Expect(2) = 1e-15
 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 5/134 (3%)
 Frame = -3

Query: 1113 WILWLHDCLFKNKSLWT-SNLPSNSPWCVKEILKLRHEAKHHLSYSISRNSTLLMWHDPW 937
            W+ WL   L +  S W+ S   +   W  K+ILK R  A   + + I   S    W D W
Sbjct: 157  WVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNW 216

Query: 936  IRNESLISQLDHDIISITESFSLAPIRSFIVDGH*SNNGHNHVLAIDLRNILATVNF--- 766
             +   LI    H           A +   +V+     + H+ +L I+  +++A V     
Sbjct: 217  SKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRPRRHRHDTLLRIE--DVIAEVRHQGL 274

Query: 765  -SNEDRVSWNGQSN 727
             S ED V W G  +
Sbjct: 275  TSGEDTVRWKGNGD 288


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 63.9 bits (154), Expect(2) = 3e-14
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
 Frame = -2

Query: 637  PKCAFFFWLALKDRLLTKGKLVTFGLNINPICTLCYSSVESVDHLFMDCPYTYLVLRSSP 458
            PK +F  WLA   RL T  +++ +   I   C  C  ++E+ DHLF  C +T ++     
Sbjct: 1067 PKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLA 1126

Query: 457  VPI-ALSWTS-WQSGI--FTQGNEPLIKKMLAHLFISVIVYCIWRERNDRVHHNGVAKNV 290
              I    +TS WQS I   T      ++  L        +Y +WRERN R  H       
Sbjct: 1127 RGIFKTQYTSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERNGR-RHGEPPNTA 1185

Query: 289  DQLVFLVKRMVRERVYSI 236
             QLV  + + +R ++ SI
Sbjct: 1186 SQLVGWIDKQIRNQLSSI 1203



 Score = 41.6 bits (96), Expect(2) = 3e-14
 Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 7/160 (4%)
 Frame = -3

Query: 1113 WILWLHDCLFKNKSLW-TSNLPSNSPWCVKEILKLRHEAKHHLSYSISRNSTLLMWHDPW 937
            W+ W+   L +N S W      S   W  K++LK R  AK      +        W+D W
Sbjct: 902  WVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNW 961

Query: 936  IRNESLISQL-DHDIISITESFSLAPIRSFIVDGH*SNNGHNHVLAIDLRNILATVNFSN 760
                 L+ +  D  +I +  S  +    ++       +    + +  D            
Sbjct: 962  SDLGQLLERTGDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNVIEDALKKSWDTRTET 1021

Query: 759  EDRVSWNGQSNP-----NISDI*HSIRNVGNPPLWVHAVW 655
            ED+V W G+S+      +  D  H  R+      W   +W
Sbjct: 1022 EDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIW 1061


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 59.7 bits (143), Expect(2) = 3e-14
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
 Frame = -2

Query: 637  PKCAFFFWLALKDRLLTKGKLVTFGLNINPICTLCYSSVESVDHLFMDCPYTYLV--LRS 464
            PK +F  WLA  DRL T  ++  +    +  C  C    +S DHLF +CPY+  V  + +
Sbjct: 1291 PKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVWTVTA 1350

Query: 463  SPVPIALSWTSWQSGIFTQGN--EPLIKKMLAHLFISVIVYCIWRERNDRVHHNGVAKNV 290
              +      T W   + T  +  +  ++  L        VY IW ERN R H N    + 
Sbjct: 1351 KNILTTRFTTDWHLLLNTVSSLQQNRVENFLVRYAFQASVYSIWSERNRRRHGN-TLHSA 1409

Query: 289  DQLVFLVKRMVRERVYSIKV 230
             +L+  + + VR  + SI++
Sbjct: 1410 TRLIGWIDKQVRNILSSIRI 1429



 Score = 45.4 bits (106), Expect(2) = 3e-14
 Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 10/163 (6%)
 Frame = -3

Query: 1113 WILWLHDCLFKNKSLWT-SNLPSNSPWCVKEILKLRHEAKHHLSYSISRNSTLLMWHDPW 937
            W+ W+   L KN S W   +  +   W  K++LK R  AK      +        W+D W
Sbjct: 1126 WVKWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIEVHNGQRTSFWYDDW 1185

Query: 936  IRNESLISQL-DHDIISITESFSLAPIRSFIVDGH*SNNGHNHVLAIDLRNILATVNFSN 760
                 +++ + D  II +        + + + D H S   H       + N++AT   + 
Sbjct: 1186 SCMGRIMNFIGDKGIIDL--GIKRDKLVAEVWDTHRSRR-HITDYLNQVENVIATSKANR 1242

Query: 759  E---DRVSWNGQSN---PNIS--DI*HSIRNVGNPPLWVHAVW 655
            +   D V W G+++   P  S  D  ++IR       W   VW
Sbjct: 1243 KEKADDVVWRGRNDIYKPQFSTRDTWNNIRTTATKVTWYKGVW 1285


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 52.0 bits (123), Expect(2) = 8e-13
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
 Frame = -2

Query: 637  PKCAFFFWLALKDRLLTKGKLVTFGLN--INPICTLCYSSVESVDHLFMDCPYTYLVLRS 464
            PK A   WLA+ +RL T  +++ +  +  ++  C LC ++ ++++HLF  C Y      +
Sbjct: 714  PKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSY------A 767

Query: 463  SPVPIALSWTSWQSGIFTQGNEPL----------IKKMLAHLFISVIVYCIWRERNDRVH 314
            S V  AL+   W++   T+ +  L          ++  L        +Y +WRERN R H
Sbjct: 768  STVWAALAKGIWKTRYSTRWSHLLTHISTHFQDRVEGFLTRYIFQATIYHVWRERNGRRH 827



 Score = 48.5 bits (114), Expect(2) = 8e-13
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
 Frame = -3

Query: 1113 WILWLHDCLFKNKSLWT-SNLPSNSPWCVKEILKLRHEAKHHLSYSISRNSTLLMWHDPW 937
            W  W+ + L + KS+W+     S   W  ++ILK+R  AK      +    +   W+D W
Sbjct: 549  WTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHW 608

Query: 936  IRNESLISQLDHDIISITESFSLA-PIRSFIVDG--H*SNNGHNHVLAIDLRNILATVNF 766
              +  LI     D +    +  L  P  + + D     S   H   L  ++  ++A    
Sbjct: 609  SAHGRLI-----DTVGDKGTIDLGIPREASVADAWTRRSRRRHRTSLLNEIEEMMAYQRI 663

Query: 765  SN---EDRVSWNGQSN---PNIS--DI*HSIRNVGNPPLWVHAVW 655
             +   ED V W G+++   P+ S  D  H I+   +   W   VW
Sbjct: 664  HHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVW 708