BLASTX nr result

ID: Angelica22_contig00028895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028895
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303565.1| GRAS family transcription factor [Populus tr...    59   4e-07
gb|AFH54534.1| GRAS family protein, partial [Dimocarpus longan]        57   2e-06

>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +3

Query: 6   NYRVEKQGHDDGSSALTLSWSDQSLYTVSAWAPLDIAG 119
           +Y+V+KQGH++  +ALTLSW DQ LYTVSAW PLDIAG
Sbjct: 621 SYKVKKQGHEE--AALTLSWLDQPLYTVSAWTPLDIAG 656


>gb|AFH54534.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 178

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 6   NYRVEKQGHDDGSSALTLSWSDQSLYTVSAWAPLDIAG 119
           NY V KQ   DG +ALTLSW DQSLYTVS WAP+D+AG
Sbjct: 133 NYSVRKQ-EQDGVAALTLSWLDQSLYTVSGWAPVDVAG 169


Top