BLASTX nr result

ID: Angelica22_contig00028881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028881
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_002528356.1| pentatricopeptide repeat-containing protein,...    80   1e-13
ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...    79   4e-13
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10

>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/116 (44%), Positives = 69/116 (59%)
 Frame = +1

Query: 4   HSQAIVKNPAQTRSQLTHLLTLYAKSTTQTHSTIILKLFNQLPSHDVVSWTSLISHFSKT 183
           H+QAI K+PA       +L+T Y+K+    +S    +LFNQ+P  D+VSWT+LIS  S T
Sbjct: 33  HAQAI-KSPATECVVYNNLITRYSKANLLHYSA---RLFNQIPFPDIVSWTALISAHSST 88

Query: 184 TLSFRHFISMLRYPTSPNQRTXXXXXXXXXXXXXXXXGVQLHCVAFKLGVCYGAFS 351
            LS RHF+SMLRYPT PN+RT                G  LH +A+KL +C G +S
Sbjct: 89  FLSLRHFVSMLRYPTFPNERTLAPLFKTCASLPCVSFGFALHSLAYKLSLCNGPYS 144


>ref|XP_002528356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532224|gb|EEF34028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 356

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/117 (41%), Positives = 64/117 (54%)
 Frame = +1

Query: 1   IHSQAIVKNPAQTRSQLTHLLTLYAKSTTQTHSTIILKLFNQLPSHDVVSWTSLISHFSK 180
           +H+QAI K+P    S   HL+TLY++S      +   +LF+ LPS ++VSWTSLIS  + 
Sbjct: 14  LHAQAI-KSPYTNLSCFNHLITLYSRSPNFLVFSYANRLFSLLPSPNIVSWTSLISAHTH 72

Query: 181 TTLSFRHFISMLRYPTSPNQRTXXXXXXXXXXXXXXXXGVQLHCVAFKLGVCYGAFS 351
           + LS  HF+SMLR P  PNQRT                G  LH +A KL +    FS
Sbjct: 73  SFLSLHHFLSMLRRPILPNQRTLASLFKACTNLSALSFGFSLHSMALKLSLDTQPFS 129


>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/111 (41%), Positives = 65/111 (58%)
 Frame = +1

Query: 1   IHSQAIVKNPAQTRSQLTHLLTLYAKSTTQTHSTIILKLFNQLPSHDVVSWTSLISHFSK 180
           IH+QAI K+    RS    L+TLY+KS   + +  I    + +PS +VVSWT+LIS ++ 
Sbjct: 35  IHAQAI-KSAITDRSFYNSLITLYSKSNLLSKAVRIFH--HHIPSPNVVSWTALISAYAS 91

Query: 181 TTLSFRHFISMLRYPTSPNQRTXXXXXXXXXXXXXXXXGVQLHCVAFKLGV 333
           T+ +  HFISMLR+PT PNQRT                G+QLH ++ KL +
Sbjct: 92  TSFALLHFISMLRHPTLPNQRTLASLLKTCASLPSLSFGLQLHSLSLKLSL 142


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
 Frame = +1

Query: 4   HSQAIVKNPAQTRSQLTHLLTLYAKSTTQTHSTIILKLFNQLP-SHDVVSWTSLISHFSK 180
           H++AI  + A+ R+   +L+T Y+KS   +++   + LF++LP   +VVSWT+LIS  S 
Sbjct: 23  HARAITSH-AKDRAVWNNLITHYSKSNLSSYA---VSLFHRLPFPPNVVSWTALISAHSN 78

Query: 181 TTLSFRHFISMLRYPTSPNQRTXXXXXXXXXXXXXXXXGVQLHCVAFKLGVCYGAFSA 354
           T LS RHF++MLR+ T PN RT                 + LH +A KL + +  F A
Sbjct: 79  TLLSLRHFLAMLRHNTLPNHRTLASLFATCAALTAVSFALSLHSLALKLALAHHPFPA 136


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
 Frame = +1

Query: 4   HSQAIVKNPAQTRSQLTHLLTLYAKSTTQTHSTIILKLFNQLP-SHDVVSWTSLISHFSK 180
           H+QAI  +  + R+   +L+T Y+KS   +++   + LF +LP   +VVSWT+LIS  S 
Sbjct: 23  HAQAITSH-IKDRAVWNNLITHYSKSDLSSYA---VSLFQRLPFPPNVVSWTALISAHSN 78

Query: 181 TTLSFRHFISMLRYPTSPNQRTXXXXXXXXXXXXXXXXGVQLHCVAFKLGVCYGAFSA 354
           T LS RHF++MLR+ T PN RT                 + LH +A KL +    F A
Sbjct: 79  TLLSLRHFLAMLRHNTLPNHRTVASLFTTCAALTAVSFALSLHSLALKLSLSQHPFPA 136


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