BLASTX nr result

ID: Angelica22_contig00028776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028776
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    72   6e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    56   3e-06
ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228...    55   8e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = +1

Query: 58   SLNIFYQSAEGRAEYKKWVSKLLGFSFDIQFKPGNSNRVADALSRKTVGEIE 213
            SL    Q  E  AE++KWVSKL+G+ F+I +KPG SNRVADALSRKTVGE+E
Sbjct: 1056 SLRYITQQREIGAEFQKWVSKLMGYDFEIHYKPGLSNRVADALSRKTVGEVE 1107


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +1

Query: 100  YKKWVSKLLGFSFDIQFKPGNSNRVADALSRKTVGEIE 213
            Y+KWV KLLGF F+I++KPG  N+VADALSRK   E E
Sbjct: 1002 YQKWVGKLLGFDFEIKYKPGGHNKVADALSRKHPPEAE 1039


>ref|XP_004169413.1| PREDICTED: uncharacterized protein LOC101228880 [Cucumis sativus]
          Length = 1099

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +1

Query: 58   SLNIFYQSAEGRAEYKKWVSKLLGFSFDIQFKPGNSNRVADALSRKTV 201
            SL    +    + +Y+KW++KLLG+SF++ +KPG  N+VADALSR T+
Sbjct: 997  SLKFLLEQRVIQPQYQKWIAKLLGYSFEVMYKPGLENKVADALSRVTL 1044


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