BLASTX nr result

ID: Angelica22_contig00028564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028564
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   242   2e-62
ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [C...   242   2e-62
ref|XP_002285340.1| PREDICTED: probable pectate lyase 5 [Vitis v...   241   3e-62
ref|XP_002866540.1| pectate lyase [Arabidopsis lyrata subsp. lyr...   241   4e-62
ref|NP_568967.1| putative pectate lyase 22 [Arabidopsis thaliana...   241   6e-62

>ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 22-like
           [Cucumis sativus]
          Length = 413

 Score =  242 bits (618), Expect = 2e-62
 Identities = 110/120 (91%), Positives = 118/120 (98%)
 Frame = +1

Query: 1   RGSSVHIAGGPCITIQYVTNIIIHGVNIHDCKQGGNTDVRDSPSHYGYRTISDGDGVSIF 180
           RG+SVHIAGGPCITIQYVTNIIIHG+NIHDCKQGGNTDVRDSP H+G+RTISDGDGVSIF
Sbjct: 159 RGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIF 218

Query: 181 GGSHIWVDHCSLSNCNDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 360
           GGSH+WVDHCSLSNCNDGLIDAI GSTAITISNNYMTHH+KVMLLGHSD++TQDKNMQVT
Sbjct: 219 GGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVT 278


>ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [Cucumis sativus]
          Length = 413

 Score =  242 bits (618), Expect = 2e-62
 Identities = 110/120 (91%), Positives = 118/120 (98%)
 Frame = +1

Query: 1   RGSSVHIAGGPCITIQYVTNIIIHGVNIHDCKQGGNTDVRDSPSHYGYRTISDGDGVSIF 180
           RG+SVHIAGGPCITIQYVTNIIIHG+NIHDCKQGGNTDVRDSP H+G+RTISDGDGVSIF
Sbjct: 159 RGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIF 218

Query: 181 GGSHIWVDHCSLSNCNDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 360
           GGSH+WVDHCSLSNCNDGLIDAI GSTAITISNNYMTHH+KVMLLGHSD++TQDKNMQVT
Sbjct: 219 GGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVT 278


>ref|XP_002285340.1| PREDICTED: probable pectate lyase 5 [Vitis vinifera]
           gi|296081403|emb|CBI16836.3| unnamed protein product
           [Vitis vinifera]
          Length = 403

 Score =  241 bits (616), Expect = 3e-62
 Identities = 109/120 (90%), Positives = 117/120 (97%)
 Frame = +1

Query: 1   RGSSVHIAGGPCITIQYVTNIIIHGVNIHDCKQGGNTDVRDSPSHYGYRTISDGDGVSIF 180
           RG+SVHIAGGPCITIQYVTNIIIHG+NIHDCKQGGN +VRDSP HYG+RTISDGDGVSIF
Sbjct: 149 RGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNANVRDSPDHYGWRTISDGDGVSIF 208

Query: 181 GGSHIWVDHCSLSNCNDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 360
           GGSH+WVDHCSLSNCNDGL+DAI GSTAITISNNYMTHHNKVMLLGHSD++TQDKNMQVT
Sbjct: 209 GGSHVWVDHCSLSNCNDGLVDAIHGSTAITISNNYMTHHNKVMLLGHSDSYTQDKNMQVT 268


>ref|XP_002866540.1| pectate lyase [Arabidopsis lyrata subsp. lyrata]
           gi|297312375|gb|EFH42799.1| pectate lyase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score =  241 bits (615), Expect = 4e-62
 Identities = 109/120 (90%), Positives = 117/120 (97%)
 Frame = +1

Query: 1   RGSSVHIAGGPCITIQYVTNIIIHGVNIHDCKQGGNTDVRDSPSHYGYRTISDGDGVSIF 180
           RG+SVHI+GGPCITIQYVTNIIIHG++IHDCKQGGNT VRDSP HYGYRT+SDGDGVSIF
Sbjct: 154 RGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIF 213

Query: 181 GGSHIWVDHCSLSNCNDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 360
           GGSH+WVDHCSLSNCNDGLIDAIRGSTAITISNNY+THHNKVMLLGHSDT+ QDKNMQVT
Sbjct: 214 GGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYVQDKNMQVT 273


>ref|NP_568967.1| putative pectate lyase 22 [Arabidopsis thaliana]
           gi|32129906|sp|Q93Z25.1|PEL22_ARATH RecName:
           Full=Probable pectate lyase 22; Flags: Precursor
           gi|16648840|gb|AAL25610.1| AT5g63180/MDC12_15
           [Arabidopsis thaliana] gi|332010332|gb|AED97715.1|
           putative pectate lyase 22 [Arabidopsis thaliana]
          Length = 432

 Score =  241 bits (614), Expect = 6e-62
 Identities = 109/120 (90%), Positives = 117/120 (97%)
 Frame = +1

Query: 1   RGSSVHIAGGPCITIQYVTNIIIHGVNIHDCKQGGNTDVRDSPSHYGYRTISDGDGVSIF 180
           RG+SVHI+GGPCITIQYVTNIIIHG++IHDCKQGGNT VRDSP HYGYRT+SDGDGVSIF
Sbjct: 176 RGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIF 235

Query: 181 GGSHIWVDHCSLSNCNDGLIDAIRGSTAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVT 360
           GGSH+WVDHCSLSNCNDGLIDAIRGSTAITISNNY+THHNKVMLLGHSDT+ QDKNMQVT
Sbjct: 236 GGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVT 295


Top