BLASTX nr result

ID: Angelica22_contig00028549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028549
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like...    73   1e-10
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]    71   3e-10
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...    61   3e-07

>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
          Length = 404

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 71/217 (32%), Positives = 100/217 (46%), Gaps = 45/217 (20%)
 Frame = +3

Query: 3   IRSHTTCTLCRAGIVPNNDVNFCSALAQNDQNSSVWGTSEESHLENVSIGGEVMDFNQVR 182
           + SHT C LCRA I+ ++ VN    L  NDQNS   G +E++ +EN S   E +D N VR
Sbjct: 192 LSSHTNCPLCRARII-SDIVN--PPLESNDQNSRSLGPNEQTQMENSSNDTE-LDNNLVR 247

Query: 183 NEIIASREVADDGGTENCEVDDQRTETKSIEA--DVFSDRNGASEVVENSSNNTKTIKRS 356
           +  +    V   G  E   +DD+RT  + + +  DV  + NG S       +  + ++RS
Sbjct: 248 SRGVYESTVGRGGTGELQILDDERTSKEGVNSNGDVVLEVNGNSANNHVVDSEIQPVRRS 307

Query: 357 FSVDLNSF----------------GDTLVINLDER----------------------SSS 422
            S+D +S                 G+ +   +D R                      S S
Sbjct: 308 VSMDSSSAATIFFGLAKFHADESKGNWVDETMDGRKFDSGSVPKRDVAYTSTFRQMGSPS 367

Query: 423 VAQTL---PPRMKRSVSCSGKFFLSRHFQS--AILPL 518
           +AQ L   P  MKRS SC G+FFL RH +S  AILPL
Sbjct: 368 IAQCLHKGPISMKRSNSCGGRFFLPRHNRSTNAILPL 404


>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
          Length = 404

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 45/217 (20%)
 Frame = +3

Query: 3   IRSHTTCTLCRAGIVPNNDVNFCSALAQNDQNSSVWGTSEESHLENVSIGGEVMDFNQVR 182
           + SHT C LCRA I+ ++ VN    L  NDQNS   G +E++ +EN S   E+ + N VR
Sbjct: 192 LSSHTNCPLCRARII-SDIVN--PPLESNDQNSRSLGPNEQTQMENSSNDTELXN-NLVR 247

Query: 183 NEIIASREVADDGGTENCEVDDQRTETKSIEA--DVFSDRNGASEVVENSSNNTKTIKRS 356
           +  +    V   G  E   +DD+RT  + + +  DV  + NG S       +  + ++RS
Sbjct: 248 SRGVYESTVGRGGTGELQILDDERTSKEGVNSNGDVVLEVNGNSANNHVVDSEIQPVRRS 307

Query: 357 FSVDLNSF----------------GDTLVINLDER----------------------SSS 422
            S+D +S                 G+ +   +D R                      S S
Sbjct: 308 VSMDSSSAATIFFGLAKFHADESKGNWVDETMDGRKFDSGSVPKRDVAYTSTFRQMGSPS 367

Query: 423 VAQTL---PPRMKRSVSCSGKFFLSRHFQS--AILPL 518
           +AQ L   P  MKRS SC G+FFL RH +S  AILPL
Sbjct: 368 IAQCLHKGPISMKRSNSCGGRFFLPRHNRSTNAILPL 404


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
 Frame = +3

Query: 3   IRSHTTCTLCRAGIVPNNDVNFCSALAQNDQNSSVWGTSEESHLENVSIGGEVMDFNQVR 182
           + SHT C +CRAGIV +      +     +Q+    G  EE+ +E    GG+   F ++ 
Sbjct: 189 LSSHTNCPMCRAGIVSST-----AGAPSPEQSVENSGPLEEARVEIPENGGQ---FEEIE 240

Query: 183 NEI----IASREVADDGGTEN----CEVDDQRT-ETKSIEADVFSDRNGASEVV------ 317
           +E+    I   E  + GG EN    CEV  +   E + +   V  D   AS +       
Sbjct: 241 DEVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRRSVSMDSLSASMISLALANV 300

Query: 318 ------ENSSNNTKTIKRSFS--VDLNSFGDTLVINLDERSSS--VAQTLPPRMKRSVSC 467
                  NS +     K+S    V     G+  ++ L E SS   + Q+    MKRS SC
Sbjct: 301 HPQKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESSSMGRILQSGSTSMKRSFSC 360

Query: 468 SGKFFLSRH--FQSAILPL 518
           SGK FL RH   +S++LPL
Sbjct: 361 SGKLFLLRHNRRRSSVLPL 379


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