BLASTX nr result

ID: Angelica22_contig00028500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028500
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    64   1e-08
emb|CBI22055.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]    55   5e-06

>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
           predicted protein [Populus trichocarpa]
          Length = 1476

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/101 (47%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
 Frame = -3

Query: 260 MVLLQHTTSSRKRSNPNSFVPPLAQPPKLPKSH---------------HNXXXXXXXXXX 126
           MV L     SRKR  P+SF+PP  QP K+PKS                 +          
Sbjct: 1   MVFLHQQNPSRKR--PSSFIPPFPQP-KIPKSSTTTTKKPPQSQNEAVEDNQVSSSSSSS 57

Query: 125 PIDKMASVLAEAGCTLINSLGPPCLPSDCHKLRNHLQRLFS 3
            +DK+ S+LA+AGCTLIN  GPPCLPSD HK RNHL RLFS
Sbjct: 58  SVDKLVSILADAGCTLINPSGPPCLPSDHHKFRNHLNRLFS 98


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
           gi|223538184|gb|EEF39794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1188

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = -3

Query: 260 MVLLQHTTSSRKR----SNPNSFVPPLAQPPKLPKSHH-----NXXXXXXXXXXPIDKMA 108
           MV L H   SRKR    S+ +SF+ PL +PPK+P S       +           IDKM 
Sbjct: 1   MVFLHHQAPSRKRPSSSSSSSSFLSPL-RPPKIPNSTAAEPPPSSSCSENDGVQAIDKMV 59

Query: 107 SVLAEAGCTLINSLGPPCLPSDCHKLRNHLQRLFS 3
           S+LA+AGCTL+N  GPPCLPSD  KLR+HL RLFS
Sbjct: 60  SILADAGCTLVNPSGPPCLPSDPLKLRSHLHRLFS 94


>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2
           protein-like [Vitis vinifera]
          Length = 1069

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 21/106 (19%)
 Frame = -3

Query: 257 VLLQHTTSSRKRSNPNSFVPPLAQPPKLPK---------------------SHHNXXXXX 141
           ++L H  SSRKR   N    P A PPK+PK                              
Sbjct: 1   MVLHHQLSSRKRPAINH---PFA-PPKIPKPKTTPTPTPTTTTTPTTTNEVDQSQRLQND 56

Query: 140 XXXXXPIDKMASVLAEAGCTLINSLGPPCLPSDCHKLRNHLQRLFS 3
                 IDKM S+LA+AGCTL +  GPPCLPS+ H  R HL RLFS
Sbjct: 57  VAEATAIDKMVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFS 102


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 21/106 (19%)
 Frame = -3

Query: 257 VLLQHTTSSRKRSNPNSFVPPLAQPPKLPK---------------------SHHNXXXXX 141
           ++L H  SSRKR   N    P A PPK+PK                              
Sbjct: 1   MVLHHQLSSRKRPAINH---PFA-PPKIPKPKTTPTPTPTTTTTPTTTNEVDQSQRLQND 56

Query: 140 XXXXXPIDKMASVLAEAGCTLINSLGPPCLPSDCHKLRNHLQRLFS 3
                 IDKM S+LA+AGCTL +  GPPCLPS+ H  R HL RLFS
Sbjct: 57  VAEATAIDKMVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFS 102


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -3

Query: 113 MASVLAEAGCTLINSLGPPCLPSDCHKLRNHLQRLFS 3
           M S+LA+AGCTL +  GPPCLPS+ H  R HL RLFS
Sbjct: 1   MVSLLADAGCTLFHPSGPPCLPSNPHNFRRHLHRLFS 37


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