BLASTX nr result

ID: Angelica22_contig00028467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028467
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
gb|ACN85235.1| EMB2261 putative [Oryza minuta]                         58   7e-07
ref|XP_002866920.1| pentatricopeptide repeat-containing protein ...    57   2e-06
gb|ACN85287.1| EMB2261 putative [Oryza australiensis]                  56   3e-06

>ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 737

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 42/57 (73%)
 Frame = -3

Query: 193 AIVAMTVLCRYMTSAVRLFETSKVKDVITWNAIVRGFSQNGHGHESLSGFKRMLKAK 23
           A++ M   C  M SA  LFE + ++DV+TWN ++ GF+QNGHG ESL+ F+RM++AK
Sbjct: 277 ALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAK 333


>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 580

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = -3

Query: 193 AIVAMTVLCRYMTSAVRLFETSKVKDVITWNAIVRGFSQNGHGHESLSGFKRMLKA 26
           A++ M   C  M SA  LF+    KD+++WN+++ GF+QNGHG ESL+ F+RM++A
Sbjct: 323 ALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEA 378


>gb|ACN85235.1| EMB2261 putative [Oryza minuta]
          Length = 612

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = -3

Query: 193 AIVAMTVLCRYMTSAVRLFETSKVKDVITWNAIVRGFSQNGHGHESLSGFKRMLKAKP 20
           A+V +   C  +  A  +FE S V++ ITWNA++ GF+QNGHG ++++ FKRM++  P
Sbjct: 381 ALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFTQNGHGEQAINLFKRMVREGP 438


>ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312756|gb|EFH43179.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 559

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = -3

Query: 193 AIVAMTVLCRYMTSAVRLFETSKVKDVITWNAIVRGFSQNGHGHESLSGFKRMLKA--KP 20
           AIV M   C Y+ +A+++F   + K+V TWNA++ G + +GHGHESL  F+ M+K   KP
Sbjct: 346 AIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKP 405

Query: 19  CLI 11
            L+
Sbjct: 406 NLV 408


>gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
          Length = 626

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/58 (41%), Positives = 38/58 (65%)
 Frame = -3

Query: 193 AIVAMTVLCRYMTSAVRLFETSKVKDVITWNAIVRGFSQNGHGHESLSGFKRMLKAKP 20
           A+V +   C  +  A  +FE S V++ ITWNA++ GF+QNGHG  +++ F RM++  P
Sbjct: 384 ALVDLYAKCGAVDYACSVFEASTVRNTITWNAMISGFAQNGHGERAINLFNRMVREGP 441


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