BLASTX nr result

ID: Angelica22_contig00028456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028456
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   486   e-135
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   444   e-122
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...   423   e-116

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  486 bits (1250), Expect = e-135
 Identities = 224/391 (57%), Positives = 294/391 (75%), Gaps = 2/391 (0%)
 Frame = -1

Query: 1169 NHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKCISF 990
            N  L LL+TC+NM  L QIQA+L  S LF+ P  ++++LK+SADY  ++YT+L+F+ I  
Sbjct: 373  NSCLALLKTCRNMRQLSQIQAYLIISGLFRKPFVASKVLKVSADYADVNYTILIFRSIDS 432

Query: 989  PDTFCYNVVVKACALSCVPHQAVIFYFIMLKNGILPNSYTFVSLFKACVQMGYLEIGLKC 810
            PDT C N V+KA ++S V HQA++FYF  L+NG + NS+TF  LF  C + G +E G K 
Sbjct: 433  PDTVCVNAVIKAYSISSVAHQALVFYFETLRNGFMCNSFTFPPLFSCCRKXGCVEYGEKF 492

Query: 809  HGQAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGDL 630
            HGQA+KNGVD VL V+NS++HMYGC G ++ A+K+F EM  RDLVSWNS++DA+ K+G L
Sbjct: 493  HGQAIKNGVDNVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSIIDAYAKLGHL 552

Query: 629  SSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTAC 450
              AH+LFD MP +N +SWN+++ GYL  GNPGC LKLFREM     +G +TTMVSV+TAC
Sbjct: 553  VLAHRLFDAMPERNAVSWNIMMGGYLKGGNPGCALKLFREMANAGLRGGETTMVSVLTAC 612

Query: 449  GRSARLKEGKSVHGYLIRTFVRLSLIINTALIDMYSKCRRTDIARKVFERLHTRNLVCWN 270
             RSARLKEG+S+HG LIRTF++ SLI++TALIDMYSKC R D+AR V++R+   NLVCWN
Sbjct: 613  CRSARLKEGRSIHGVLIRTFLKSSLILDTALIDMYSKCERVDVARVVYDRMTKXNLVCWN 672

Query: 269  AMTLGHCLHGNPRDGLQLFAQMHTKTRLIESRIENDNSIKL--GEGVLPDEVTYVGVLCA 96
            AM LGHC+HGN  DGL+LF +M    R  +  I  D  IK   G+G++PDE+T++GVLCA
Sbjct: 673  AMILGHCIHGNAEDGLKLFEEMVDGIRSEDGEINLDKGIKRIEGQGLJPDEITFIGVLCA 732

Query: 95   CLREGLLTQGIKYFNQMTDVFGVKPNFAHYW 3
            C REGLL +G  Y++QM + F +KPNFAHYW
Sbjct: 733  CAREGLLAEGRSYYSQMINTFHIKPNFAHYW 763


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
            [Cucumis sativus]
          Length = 575

 Score =  447 bits (1149), Expect = e-123
 Identities = 213/395 (53%), Positives = 281/395 (71%), Gaps = 3/395 (0%)
 Frame = -1

Query: 1178 PSINHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKC 999
            P  N    LLQ+CQ++  L+Q   HL TS LF +  ++ R+L  ++++G I YT+L+F+ 
Sbjct: 47   PRHNQSHSLLQSCQSVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRH 106

Query: 998  ISFPDTFCYNVVVKACALSCVPHQAVIFYFIMLKNGILPNSYTFVSLFKACVQMGYLEIG 819
            I  P+TFC N V+KA +LS VP +AV  YF  L NG+ P+SYTF+SLF AC   G    G
Sbjct: 107  IKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWLGNGLRPDSYTFLSLFSACASFGCGASG 166

Query: 818  LKCHGQAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKV 639
             KCHGQA KNGVD V+ + NSLIHMYGC   I++ +K+F EM  +DLVSWNS+V A+ +V
Sbjct: 167  RKCHGQAFKNGVDSVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQDLVSWNSIVTAYARV 226

Query: 638  GDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVV 459
            GDL +AH +FD+MP +NV+SWN++IS YL  GNPGC +KLFR MV +  +GN+TTMV+V+
Sbjct: 227  GDLYTAHDMFDVMPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVL 286

Query: 458  TACGRSARLKEGKSVHGYLIRTFVRLSLIINTALIDMYSKCRRTDIARKVFERLHTRNLV 279
            +AC RSARL EG+SVHG++ R  ++  + INTAL+DMYSKC R  +AR+VF+RL  RNLV
Sbjct: 287  SACSRSARLNEGRSVHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFDRLMIRNLV 346

Query: 278  CWNAMTLGHCLHGNPRDGLQLFAQMHTKTRLIESRIENDNSIKLGEG---VLPDEVTYVG 108
             WNAM LGH LHGNP+DGL+LF +M  + R I     N    K  EG   V PD++T++G
Sbjct: 347  TWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVFPDQITFIG 406

Query: 107  VLCACLREGLLTQGIKYFNQMTDVFGVKPNFAHYW 3
            VLCAC R GLL     YF++M +VF V+PNF HYW
Sbjct: 407  VLCACARAGLLKDAENYFDEMINVFLVRPNFGHYW 441


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355513563|gb|AES95186.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  444 bits (1143), Expect = e-122
 Identities = 226/406 (55%), Positives = 284/406 (69%), Gaps = 11/406 (2%)
 Frame = -1

Query: 1187 NTTPSINHLLHL-----LQT--CQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQ 1029
            +++PS   L HL     LQ   CQ   HL QIQ+ L TSS ++NP  S  +L  +++   
Sbjct: 26   SSSPSSQFLTHLHFQSLLQPSHCQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCT 85

Query: 1028 IDYTLLLFKCISFP-DTFCYNVVVKACALSCVPHQAVIFYFIMLKNGILPNSYTFVSLFK 852
            +D+T L+F   + P DTFC N V+ +   S VPH+A++FYF  LK G   NSYTFVSL  
Sbjct: 86   VDFTFLIFHHFNNPLDTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLIS 145

Query: 851  ACVQMGYLEIGLKCHGQAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVS 672
            AC +M  ++ G  CHGQAVKNGVD VL VENSL HMYG  G+++VA+ +F  M  RDLVS
Sbjct: 146  ACSKMSCVDNGKMCHGQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVS 205

Query: 671  WNSLVDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRF 492
            WNS++D +VKVGDLS+AHKLFD+MP +N+++WN LISGY    NPG  LKLFREM  +R 
Sbjct: 206  WNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRI 265

Query: 491  KGNDTTMVSVVTACGRSARLKEGKSVHGYLIRTFVRLSLIINTALIDMYSKCRRTDIARK 312
            + N  TMV  VTACGRS RLKEGKSVHG +IR F+R SLI++TALIDMY KC R + A K
Sbjct: 266  RENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASK 325

Query: 311  VFERLHTRNLVCWNAMTLGHCLHGNPRDGLQLFAQMHTKTRLIESRIENDNSIKLGEG-- 138
            VFER+ +RNLV WNAM LGHC+HGNP DGL LF  M    R ++  +E D S     G  
Sbjct: 326  VFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMER-VKGEVEVDESSSADRGLV 384

Query: 137  -VLPDEVTYVGVLCACLREGLLTQGIKYFNQMTDVFGVKPNFAHYW 3
             +LPDE+T++G+LCAC R  LL++G  YF QM DVFG+KPNFAH+W
Sbjct: 385  RLLPDEITFIGILCACARAELLSEGRSYFKQMIDVFGLKPNFAHFW 430


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  437 bits (1124), Expect = e-120
 Identities = 216/399 (54%), Positives = 285/399 (71%)
 Frame = -1

Query: 1199 LTLYNTTPSINHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDY 1020
            +T YN     N    LL +  N  HLYQIQA L T  LF    +S R+LK  AD+G IDY
Sbjct: 47   ITSYN-----NPRFELLYSTLNPFHLYQIQAQLITCGLFS--LWSPRLLKHFADFGDIDY 99

Query: 1019 TLLLFKCISFPDTFCYNVVVKACALSCVPHQAVIFYFIMLKNGILPNSYTFVSLFKACVQ 840
            T+ +FK I+ P TF  N VVKA +LS  P++A++FYF MLK+G  PNSYTFVSLF  C +
Sbjct: 100  TIFIFKFIASPGTFVVNNVVKAYSLSSEPNKALVFYFEMLKSGFCPNSYTFVSLFGCCAK 159

Query: 839  MGYLEIGLKCHGQAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSL 660
            +G  ++G K HGQAVKNGVD +L VENSLIH YGC G + +AKK+F EM  RDLVSWNS+
Sbjct: 160  VGCAKLGKKYHGQAVKNGVDRILPVENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSI 219

Query: 659  VDAFVKVGDLSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGND 480
            +D +  +G+L  AH LF++MP +NV+SWN+LISGYL   NPGC L LFR+M+    +GND
Sbjct: 220  IDGYATLGELGIAHGLFEVMPERNVVSWNILISGYLKGNNPGCVLMLFRKMMNDGMRGND 279

Query: 479  TTMVSVVTACGRSARLKEGKSVHGYLIRTFVRLSLIINTALIDMYSKCRRTDIARKVFER 300
            +T+VSV++ACGRSARL+EG+SVHG++++ F  +++I  T LIDMY++C + ++AR++F++
Sbjct: 280  STIVSVLSACGRSARLREGRSVHGFIVKKFSSMNVIHETTLIDMYNRCHKVEMARRIFDK 339

Query: 299  LHTRNLVCWNAMTLGHCLHGNPRDGLQLFAQMHTKTRLIESRIENDNSIKLGEGVLPDEV 120
            +  RNL CWNAM LGHCLHGNP DGL+LF  M  +  L +            + V PDEV
Sbjct: 340  VVRRNLGCWNAMILGHCLHGNPDDGLELFKDMVDRAGLGKR-----------DSVHPDEV 388

Query: 119  TYVGVLCACLREGLLTQGIKYFNQMTDVFGVKPNFAHYW 3
            T++GVLCAC R GLLT+G  +F+QM    G+KPNFAH+W
Sbjct: 389  TFIGVLCACARAGLLTEGKNFFSQMIYNHGLKPNFAHFW 427


>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like
            [Glycine max]
          Length = 579

 Score =  423 bits (1087), Expect = e-116
 Identities = 207/390 (53%), Positives = 277/390 (71%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1169 NHLLHLLQ-TCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKCIS 993
            +H   LLQ +CQN  HL QIQA L TSSLF+NP  +  IL  ++    + YT ++F+ I+
Sbjct: 41   SHFEALLQNSCQNARHLLQIQALLVTSSLFRNPYLARTILSRASHLCDVAYTRVIFRSIN 100

Query: 992  FPDTFCYNVVVKACALSCVPHQAVIFYFIMLKNGILPNSYTFVSLFKACVQMGYLEIGLK 813
              DTFC N+V++A + S  P +A++FYF  L  G  PNSYTFV L  +C +MG +  G +
Sbjct: 101  SLDTFCVNIVIQAYSNSHAPREAIVFYFRSLMRGFFPNSYTFVPLVASCAKMGCIGSGKE 160

Query: 812  CHGQAVKNGVDGVLQVENSLIHMYGCFGFIDVAKKLFVEMFVRDLVSWNSLVDAFVKVGD 633
            CH QA KNGVD VL V+NSLIHMY C G + +A+ LF  M  RDLVSWNS+++  + VG+
Sbjct: 161  CHAQATKNGVDSVLPVQNSLIHMYVCCGGVQLARVLFDGMLSRDLVSWNSIINGHMMVGE 220

Query: 632  LSSAHKLFDLMPHKNVISWNVLISGYLSDGNPGCGLKLFREMVGMRFKGNDTTMVSVVTA 453
            L++AH+LFD MP +N+++WNV+ISGYL   NPG  +KLFREM  +  +GN  TMV V TA
Sbjct: 221  LNAAHRLFDKMPERNLVTWNVMISGYLKGRNPGYAMKLFREMGRLGLRGNARTMVCVATA 280

Query: 452  CGRSARLKEGKSVHGYLIRTFVRLSLIINTALIDMYSKCRRTDIARKVFERLHTRNLVCW 273
            CGRS RLKE KSVHG ++R  +R SLI++TALI MY KCR+ ++A+ VFER+  RNLV W
Sbjct: 281  CGRSGRLKEAKSVHGSIVRMSLRSSLILDTALIGMYCKCRKVEVAQIVFERMRERNLVSW 340

Query: 272  NAMTLGHCLHGNPRDGLQLFAQMHTKTRLIESRIENDNSIKLGEGVLPDEVTYVGVLCAC 93
            N M LGHC+ G+P DGL LF  M +  ++ +  +E+D +++L    LP+EVT++GVLCAC
Sbjct: 341  NMMILGHCIRGSPEDGLDLFEVMISMGKM-KHGVESDETLRL----LPNEVTFIGVLCAC 395

Query: 92   LREGLLTQGIKYFNQMTDVFGVKPNFAHYW 3
             R  +L +G  YF QMTDVFGVKPN+AH+W
Sbjct: 396  ARAEMLDEGRSYFKQMTDVFGVKPNYAHFW 425


Top