BLASTX nr result

ID: Angelica22_contig00028362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028362
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   102   4e-20
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   100   1e-19
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   100   1e-19
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   100   1e-19
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/74 (62%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   LPPLQNQHAYHNMLSSVSQGNAVRGG-SPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQY 178
           LPPLQ+Q A+H+++  V+QGNA+RGG  P+  P + PRNY++P ASY+GSAYPAV G+QY
Sbjct: 242 LPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQY 301

Query: 179 PLAYAGGIMSNRPL 220
           P+AY GG+MS RPL
Sbjct: 302 PMAYPGGMMSPRPL 315


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/73 (58%), Positives = 61/73 (83%)
 Frame = +2

Query: 2   LPPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYP 181
           +PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP
Sbjct: 253 MPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYP 312

Query: 182 LAYAGGIMSNRPL 220
           +AY GGIMS++PL
Sbjct: 313 MAYHGGIMSHQPL 325


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/73 (58%), Positives = 61/73 (83%)
 Frame = +2

Query: 2   LPPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYP 181
           +PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP
Sbjct: 243 MPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYP 302

Query: 182 LAYAGGIMSNRPL 220
           +AY GGIMS++PL
Sbjct: 303 MAYHGGIMSHQPL 315


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/73 (58%), Positives = 61/73 (83%)
 Frame = +2

Query: 2   LPPLQNQHAYHNMLSSVSQGNAVRGGSPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQYP 181
           +PP+Q+Q A+HNM+  V+QG+A+R  +P+ +  + PRNY+VP ASY+GSAYPA+ GLQYP
Sbjct: 297 MPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYP 356

Query: 182 LAYAGGIMSNRPL 220
           +AY GGIMS++PL
Sbjct: 357 MAYHGGIMSHQPL 369


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/74 (58%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 2   LPPLQNQHAYHNMLSSVSQGNAVRGG-SPEFSPGLTPRNYSVPRASYLGSAYPAVSGLQY 178
           LPP+QNQ A+H+M+  V+QGN +RGG  P+ SP ++PRNY+   A+Y+GSAYP V+GLQY
Sbjct: 241 LPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYAP--ATYMGSAYPTVTGLQY 298

Query: 179 PLAYAGGIMSNRPL 220
           P+AY G +M++RPL
Sbjct: 299 PVAYPGAMMTHRPL 312


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