BLASTX nr result
ID: Angelica22_contig00028270
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00028270
(1467 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2... 275 2e-71
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm... 265 2e-68
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm... 260 7e-67
ref|NP_568185.1| Mitochondrial transcription termination factor ... 246 1e-62
ref|XP_002871294.1| mitochondrial transcription termination fact... 244 5e-62
>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
predicted protein [Populus trichocarpa]
Length = 400
Score = 275 bits (703), Expect = 2e-71
Identities = 134/303 (44%), Positives = 200/303 (66%), Gaps = 1/303 (0%)
Frame = +3
Query: 249 RYKSFVSIFESCGFTQTQVSSLFSESPLLLTLNREKTIRPMLEFFRNNGFSSSDLCHILT 428
R S +++ + GF++TQ+SSL + P LL N T+ P L+FF + G S L L+
Sbjct: 92 RPDSVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTLS 151
Query: 429 LDPGIMKRNIEKQIVPSYEYLKMVLKDNDRVVAAVKRSTWLFKQDIEKNLRPNIDLLRNY 608
DP ++ R++E QIVPSY +LK +L+ ++++V+A KR+TW+F +D+ KNL PN++LLR
Sbjct: 152 SDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKV 211
Query: 609 GVPDDRIAGMLRVQPRTMIQNVDRFRMVAKEVRDMGFEPVKSQFVTAFHVKNG-LRETVW 785
GVP I+ +L P M++N + F +EVR MGF+P KS FV A H G +++W
Sbjct: 212 GVPQSCISLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIW 271
Query: 786 KRKWDRYKKWGWSDDEILSAFMKQPQIMAVSEKKVDRVMDFLVNKMGWKISKISCCPAVV 965
+R ++ YK+WGW+ D+ILSAF K P M +SEKK+ + +DF VNKMGW +I CP ++
Sbjct: 272 ERCFEVYKRWGWTKDDILSAFRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVIL 331
Query: 966 MHSLENWTVPRCLVIQFLLSKGVVSEDFPLSTVIVSLESRFVENFVAKYCAEFPEVLQLY 1145
SLE +PRC VIQ L SKG++ +D L+TV++ +E RF+E FV K+ E P++L +Y
Sbjct: 332 FLSLEKRIIPRCKVIQVLWSKGLIKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVY 391
Query: 1146 ASK 1154
K
Sbjct: 392 EGK 394
>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
gi|223540048|gb|EEF41625.1| conserved hypothetical
protein [Ricinus communis]
Length = 377
Score = 265 bits (677), Expect = 2e-68
Identities = 134/304 (44%), Positives = 195/304 (64%), Gaps = 1/304 (0%)
Frame = +3
Query: 246 RRYKSFVSIFESCGFTQTQVSSLFSESPLLLTLNREKTIRPMLEFFRNNGFSSSDLCHIL 425
+R + +++ + GFT+TQ+SSL + P LL + T+ P LEFF + G SSSDL L
Sbjct: 67 KRADTVLALLKDRGFTKTQISSLVKKRPSLLLAHAHNTLLPKLEFFYSIGVSSSDLARTL 126
Query: 426 TLDPGIMKRNIEKQIVPSYEYLKMVLKDNDRVVAAVKRSTWLFKQDIEKNLRPNIDLLRN 605
+ DP ++ R+IE QIVPSY +LK +L N+++V+A+KR+TW+F +D KNL PN++ LR
Sbjct: 127 SSDPTLLTRSIENQIVPSYNFLKSILLSNEKIVSALKRTTWIFLEDYSKNLMPNVERLRE 186
Query: 606 YGVPDDRIAGMLRVQPRTMIQNVDRFRMVAKEVRDMGFEPVKSQFVTAFHVKNG-LRETV 782
GV I+ +L P ++Q F V KEV++MGF+P KS FV A H +G + +
Sbjct: 187 IGVTHSCISLLLTNFPEAVLQRHGEFNKVVKEVKEMGFDPKKSIFVMAVHAISGKSNKAI 246
Query: 783 WKRKWDRYKKWGWSDDEILSAFMKQPQIMAVSEKKVDRVMDFLVNKMGWKISKISCCPAV 962
W + ++ YK+W WS D+I +AF K P M +SEKK+ MDF VNKMG I+ CP +
Sbjct: 247 WNKCFEVYKRWDWSKDDIFAAFKKHPHCMMLSEKKIMLAMDFFVNKMGLPSKVIAQCPVL 306
Query: 963 VMHSLENWTVPRCLVIQFLLSKGVVSEDFPLSTVIVSLESRFVENFVAKYCAEFPEVLQL 1142
+ SLE VPRC VI+ L++KG+V +D L+TV+V E F++ FV KY E P +L++
Sbjct: 307 LFFSLEKRIVPRCRVIRVLMNKGLVKKDVSLATVLVPTEKCFLDRFVIKYEEEVPLLLRV 366
Query: 1143 YASK 1154
Y K
Sbjct: 367 YEGK 370
>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
gi|223540049|gb|EEF41626.1| conserved hypothetical
protein [Ricinus communis]
Length = 406
Score = 260 bits (664), Expect = 7e-67
Identities = 127/306 (41%), Positives = 199/306 (65%), Gaps = 1/306 (0%)
Frame = +3
Query: 246 RRYKSFVSIFESCGFTQTQVSSLFSESPLLLTLNREKTIRPMLEFFRNNGFSSSDLCHIL 425
+R + +++ GF++TQ+SSL + P LL + + T+ P LEFF + G S+S L L
Sbjct: 92 KRADAVLALLRDRGFSKTQISSLVKKRPFLLLAHPQNTLLPKLEFFYSIGASNSALARAL 151
Query: 426 TLDPGIMKRNIEKQIVPSYEYLKMVLKDNDRVVAAVKRSTWLFKQDIEKNLRPNIDLLRN 605
+ DP ++ R++E QI+PSY +LK +L ++++V+A+KR+TW+F +D KNL PNI+LLR
Sbjct: 152 SSDPTLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLRE 211
Query: 606 YGVPDDRIAGMLRVQPRTMIQNVDRFRMVAKEVRDMGFEPVKSQFVTAFHVKNGL-RETV 782
GV I+ +L P ++Q D+F + KEVR+M F+P KS FV A H +G +++
Sbjct: 212 AGVLHSCISLLLTHFPEALMQRHDKFSKIVKEVREMEFDPKKSTFVLAVHAISGKGNKSI 271
Query: 783 WKRKWDRYKKWGWSDDEILSAFMKQPQIMAVSEKKVDRVMDFLVNKMGWKISKISCCPAV 962
W + ++ Y +WGWS D+I +AF K P M +SEKK+ + MDF VNKMG+ I+ CP V
Sbjct: 272 WNKCFEVYMRWGWSKDDIFAAFKKHPHCMMLSEKKIMKAMDFFVNKMGFPSKVIAQCPVV 331
Query: 963 VMHSLENWTVPRCLVIQFLLSKGVVSEDFPLSTVIVSLESRFVENFVAKYCAEFPEVLQL 1142
+ SLE VPRC VI+ L++K +V ED L++V++ +E F++ FV ++ E P +L +
Sbjct: 332 LFFSLEKRIVPRCRVIRVLMNKRLVKEDVSLASVLLPVEQCFLDRFVTRFAEEIPRLLSV 391
Query: 1143 YASKSE 1160
Y K +
Sbjct: 392 YEGKRD 397
>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
[Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
putative protein [Arabidopsis thaliana]
gi|10176724|dbj|BAB09954.1| unnamed protein product
[Arabidopsis thaliana] gi|17104655|gb|AAL34216.1| unknown
protein [Arabidopsis thaliana] gi|21592327|gb|AAM64278.1|
unknown [Arabidopsis thaliana]
gi|332003836|gb|AED91219.1| Mitochondrial transcription
termination factor family protein [Arabidopsis thaliana]
Length = 405
Score = 246 bits (628), Expect = 1e-62
Identities = 120/300 (40%), Positives = 189/300 (63%), Gaps = 1/300 (0%)
Frame = +3
Query: 249 RYKSFVSIFESCGFTQTQVSSLFSESPLLLTLNREKTIRPMLEFFRNNGFSSSDLCHILT 428
R + +++ GFT Q+SSL + P+LL N E + P L FF + G S S L L
Sbjct: 100 RPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLA 159
Query: 429 LDPGIMKRNIEKQIVPSYEYLKMVLKDNDRVVAAVKRSTWLFKQDIEKNLRPNIDLLRNY 608
DP I+ R++ Q++PSY +LK VL ++++VAA++R+TW+F +D KNL PNI+ +
Sbjct: 160 SDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAET 219
Query: 609 GVPDDRIAGMLRVQPRTMIQNVDRFRMVAKEVRDMGFEPVKSQFVTAFHVKNGL-RETVW 785
GVP+ I +L P ++Q F+ +AK+ ++MGF P KS FV A H +G +++W
Sbjct: 220 GVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIW 279
Query: 786 KRKWDRYKKWGWSDDEILSAFMKQPQIMAVSEKKVDRVMDFLVNKMGWKISKISCCPAVV 965
+ ++ Y++WGWS+D+I+ AF K P M +SE+K++R M++ VN+M I+ CP V+
Sbjct: 280 DKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVL 339
Query: 966 MHSLENWTVPRCLVIQFLLSKGVVSEDFPLSTVIVSLESRFVENFVAKYCAEFPEVLQLY 1145
SLE +PRC V + L+S G+V ED+ L++++V +E F+E V KY E PE++ LY
Sbjct: 340 FFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399
>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297317131|gb|EFH47553.1| mitochondrial transcription
termination factor family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 404
Score = 244 bits (622), Expect = 5e-62
Identities = 119/300 (39%), Positives = 190/300 (63%), Gaps = 1/300 (0%)
Frame = +3
Query: 249 RYKSFVSIFESCGFTQTQVSSLFSESPLLLTLNREKTIRPMLEFFRNNGFSSSDLCHILT 428
R + +++ GFT Q+S+L + P+LL N E + P L FF + G S S L L
Sbjct: 99 RPNTVLNLLRDHGFTTAQISTLVKKRPVLLLANAESVLLPKLLFFLSIGVSKSLLARTLA 158
Query: 429 LDPGIMKRNIEKQIVPSYEYLKMVLKDNDRVVAAVKRSTWLFKQDIEKNLRPNIDLLRNY 608
DP I+ R++ Q++PSY++LK VL ++++VAA++R+TW+F +D KNL PNI+ +
Sbjct: 159 SDPTILTRSLVNQLIPSYKFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMSET 218
Query: 609 GVPDDRIAGMLRVQPRTMIQNVDRFRMVAKEVRDMGFEPVKSQFVTAFHVKNGL-RETVW 785
GVP+ I +L P ++Q F+ +AK+ ++MGF P KS FV A H +G +++W
Sbjct: 219 GVPEKCIKLLLTHFPEAVMQKSHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIW 278
Query: 786 KRKWDRYKKWGWSDDEILSAFMKQPQIMAVSEKKVDRVMDFLVNKMGWKISKISCCPAVV 965
+ ++ Y++WGWS+D+I+ AF K P M +SE+K++R M+F VN+M I+ CP V+
Sbjct: 279 DKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEFFVNEMNLAPRSIAECPVVL 338
Query: 966 MHSLENWTVPRCLVIQFLLSKGVVSEDFPLSTVIVSLESRFVENFVAKYCAEFPEVLQLY 1145
SLE +PRC V + L+S G+V ED+ L++++V +E F+E V KY E PE++ +Y
Sbjct: 339 FFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMDVY 398