BLASTX nr result

ID: Angelica22_contig00028221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028221
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598392.1| F-box protein [Medicago truncatula] gi|35834...    62   5e-08
ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncat...    55   8e-06

>ref|XP_003598392.1| F-box protein [Medicago truncatula]
           gi|358348382|ref|XP_003638226.1| F-box protein [Medicago
           truncatula] gi|355487440|gb|AES68643.1| F-box protein
           [Medicago truncatula] gi|355504161|gb|AES85364.1| F-box
           protein [Medicago truncatula]
          Length = 604

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -2

Query: 258 PSERISLVGSVRGLVCLRQAFDFKFSL-WNPAIHQYKEFTL--PPSRCRNHTASIGFGFD 88
           P+    +VGS  G++CL   +D  F L WNP+I ++KE      P+   +   + GFG+D
Sbjct: 326 PNSSCYIVGSCHGILCLAHFYDEGFILLWNPSIRKFKELPSFQKPNAISDTRMTFGFGYD 385

Query: 87  PVTDNYKVVVLSLDFRSASVYYSNSD 10
           P+ DNYKVVV+ L F   SV+++N D
Sbjct: 386 PIMDNYKVVVV-LGF---SVWFNNGD 407


>ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516029|gb|AES97652.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 396

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
 Frame = -2

Query: 237 VGSVRGLVCLRQAFDFK----FSLWNPAIHQYKEFTLPPSRCRNHTASI---GFGFDPVT 79
           VGS  G++C+ +   ++    + LWNP+I ++KE  LPP   ++   ++   GFG DP++
Sbjct: 141 VGSCNGIICVAEYHIYERFVIYRLWNPSIRKFKE--LPPLELQHTGYNLQMHGFGHDPIS 198

Query: 78  DNYKVVVLSLDFRSASV 28
           DNYKVVV+  D     V
Sbjct: 199 DNYKVVVVFRDHNKTDV 215


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