BLASTX nr result

ID: Angelica22_contig00028197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028197
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317407.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002335867.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             60   2e-07
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    60   2e-07

>ref|XP_002317407.1| predicted protein [Populus trichocarpa] gi|222860472|gb|EEE98019.1|
            predicted protein [Populus trichocarpa]
          Length = 950

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    KQTFLNSLPEPLGNETSRLLQIKNLPINSTSIGELYQNVLLALDKLCNQKKFLKQIEEQS 181
            K  FL S+P  L +ET RL + +   I++ S+G ++  VL AL+K+C+Q K+  +I +  
Sbjct: 805  KHAFLASIPRDLADETFRLFKTRKEVIDNQSLGTIFHQVLEALNKMCDQHKYFTKILQPD 864

Query: 182  KNLGSACDRNELQIKCGKN-SCSC 250
            K +  AC R +L IKC  N  C+C
Sbjct: 865  KTMLRACKRPDLLIKCSDNVDCNC 888


>ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|222859068|gb|EEE96615.1|
            predicted protein [Populus trichocarpa]
          Length = 1497

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    KQTFLNSLPEPLGNETSRLLQIKNLPINSTSIGELYQNVLLALDKLCNQKKFLKQIEEQS 181
            K  FL S+P  + +ET RL + +   I++ S+G ++  VL AL+K+C+Q K+  +I +  
Sbjct: 907  KHAFLASIPRDMADETFRLFKTRKEVIDNQSLGTIFHQVLEALNKMCDQHKYFTKILQPD 966

Query: 182  KNLGSACDRNELQIKCGKNS-CSC 250
            K +  AC R +L IKC  ++ C+C
Sbjct: 967  KTMLRACKRPDLLIKCSDHADCNC 990


>ref|XP_002335867.1| predicted protein [Populus trichocarpa] gi|222835938|gb|EEE74359.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   KQTFLNSLPEPLGNETSRLLQIKNLPINSTSIGELYQNVLLALDKLCNQKKFLKQIEEQS 181
           K  FL S+P  + +ET RL + +   I++ S+G ++  VL AL+K+C+Q K+  +I +  
Sbjct: 257 KHAFLASIPRDMADETFRLFKTRKEVIDNQSLGTIFHQVLEALNKICDQHKYFTKILQPD 316

Query: 182 KNLGSACDRNELQIKCGKNS-CSC 250
           K +  AC R +L IKC  ++ C+C
Sbjct: 317 KTMLHACKRPDLLIKCSDHADCNC 340


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/82 (34%), Positives = 48/82 (58%)
 Frame = +2

Query: 2    KQTFLNSLPEPLGNETSRLLQIKNLPINSTSIGELYQNVLLALDKLCNQKKFLKQIEEQS 181
            KQ F++SLP  L    S L++ +   +    +G++ Q     LD LC+++KF  Q+++ S
Sbjct: 983  KQAFISSLPPILSERISALIKERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMS 1042

Query: 182  KNLGSACDRNELQIKCGKNSCS 247
            ++L  AC +++L IK G   CS
Sbjct: 1043 RDLEKACTKSDLIIK-GDKGCS 1063


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/82 (34%), Positives = 48/82 (58%)
 Frame = +2

Query: 2    KQTFLNSLPEPLGNETSRLLQIKNLPINSTSIGELYQNVLLALDKLCNQKKFLKQIEEQS 181
            KQ F++SLP  L    S L++ +   +    +G++ Q     LD LC+++KF  Q+++ S
Sbjct: 982  KQAFISSLPPILSERISALIKERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMS 1041

Query: 182  KNLGSACDRNELQIKCGKNSCS 247
            ++L  AC +++L IK G   CS
Sbjct: 1042 RDLEKACTKSDLIIK-GDKGCS 1062


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