BLASTX nr result

ID: Angelica22_contig00028182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028182
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...    74   1e-11
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...    64   2e-08
ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778...    63   3e-08
ref|XP_003525658.1| PREDICTED: uncharacterized protein LOC100810...    63   3e-08
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 43/49 (87%), Gaps = 3/49 (6%)
 Frame = -2

Query: 257 VNDDCIKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 120
           +NDDCI VEG+GAPNVVGLFKG+SE +CS+N+Y   +AD+P++LLQQ A
Sbjct: 506 INDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLADIPVILLQQVA 554


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Cucumis sativus]
           gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like [Cucumis
           sativus]
          Length = 662

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
 Frame = -2

Query: 257 VNDDCIKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 120
           VNDDCI +EGEGAPNVVGLF G S+ I S N+Y   +ADLP+++L Q A
Sbjct: 507 VNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVA 555


>ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778422 [Glycine max]
          Length = 660

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = -2

Query: 257 VNDDCIKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 120
           VNDDCI V+ EG+PNV GLFKG  E   SINKY   +ADLP+++LQQ A
Sbjct: 506 VNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPVIILQQVA 554


>ref|XP_003525658.1| PREDICTED: uncharacterized protein LOC100810597 [Glycine max]
          Length = 659

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = -2

Query: 257 VNDDCIKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 120
           VNDDCI V+ EG+PNV GLFKG  E   SINKY   +ADLP+++LQQ A
Sbjct: 505 VNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPVIILQQVA 553


>ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|222838847|gb|EEE77198.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 3/49 (6%)
 Frame = -2

Query: 257 VNDDCIKVEGEGAPNVVGLFKGTSERICSINKY---VADLPMVLLQQFA 120
           V+DDCI +E EGAPNVVGLFK +S+  CS NKY   + DLP+++LQQ A
Sbjct: 514 VHDDCINIEAEGAPNVVGLFKDSSDDKCSTNKYDCNLDDLPVIILQQVA 562


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