BLASTX nr result

ID: Angelica22_contig00028108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028108
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containi...   293   3e-77
ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...   258   1e-66
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   217   2e-54
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   216   3e-54
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53

>ref|XP_002269319.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score =  293 bits (749), Expect = 3e-77
 Identities = 139/222 (62%), Positives = 174/222 (78%)
 Frame = +1

Query: 1   AKDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRR 180
           +KDVVSFN MIMGLAINGEG +AL +F KMQ++ L P++GTFLGVLCACSHSG L+ GR+
Sbjct: 219 SKDVVSFNAMIMGLAINGEGEEALRLFSKMQELSLRPNSGTFLGVLCACSHSGLLDTGRQ 278

Query: 181 LFADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLH 360
           +F DM  HF + P+LEHYACYVDLL+R G ++EA EVV SMP+ PN FVWG+LL GC LH
Sbjct: 279 MFLDMIPHFSVPPELEHYACYVDLLARVGLLEEAFEVVASMPFVPNNFVWGALLQGCRLH 338

Query: 361 KKLEYGENISKMLIRADPENSAGYVLLSNAYASDRRWGDVSELRCFMKEKGVKKHSGNSW 540
            +LE  +++S+ L++ DPENSAGYV+ SNA ASD++WG+VS LR  M+EKGV+KH G SW
Sbjct: 339 SRLELAQDVSQKLVKVDPENSAGYVMFSNALASDQQWGEVSGLRWLMREKGVRKHPGCSW 398

Query: 541 ISIEGTVHEFLAGSPSHPQIGQILDILDELSMKMKLGITYGN 666
           IS+   VHEFLAGS SHPQI  I   L+ L  +MK+  +Y N
Sbjct: 399 ISVNRVVHEFLAGSLSHPQIDSIYHTLNGLVKEMKVFASYHN 440


>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Glycine max]
          Length = 634

 Score =  258 bits (658), Expect = 1e-66
 Identities = 123/216 (56%), Positives = 161/216 (74%)
 Frame = +1

Query: 1    AKDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRR 180
            +KDVV FN MIMGLA+ G+G DAL +F+K+ + GL P+AGTFLG L ACSHSG L +GR+
Sbjct: 411  SKDVVLFNAMIMGLAVYGKGEDALRLFYKIPEFGLQPNAGTFLGALSACSHSGLLVRGRQ 470

Query: 181  LFADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLH 360
            +F +++    +   LEH ACY+DLL+R GCI+EA+EVV SMP++PN FVWG+LL GC+LH
Sbjct: 471  IFRELTLSTTL--TLEHCACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 528

Query: 361  KKLEYGENISKMLIRADPENSAGYVLLSNAYASDRRWGDVSELRCFMKEKGVKKHSGNSW 540
             ++E  + +S+ L+  DP+NSAGYV+L+NA ASD +W DVS LR  MKEKGVKK  G+SW
Sbjct: 529  SRVELAQEVSRRLVEVDPDNSAGYVMLANALASDNQWSDVSGLRLEMKEKGVKKQPGSSW 588

Query: 541  ISIEGTVHEFLAGSPSHPQIGQILDILDELSMKMKL 648
            I ++G VHEFL G  SHP+I  I   L  L   MK+
Sbjct: 589  IIVDGAVHEFLVGCLSHPEIEGIYHTLAGLVKNMKV 624


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  217 bits (553), Expect = 2e-54
 Identities = 104/215 (48%), Positives = 147/215 (68%)
 Frame = +1

Query: 4   KDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRRL 183
           + VVS++ MI GLA +G   DAL++F KM + G+ P+A TF+G+L ACSH G +EKGR+ 
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368

Query: 184 FADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLHK 363
           FA M++ + I P++EHY C VDL SR+G +QEA E +M+MP  PNG VWG+LL GC +HK
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428

Query: 364 KLEYGENISKMLIRADPENSAGYVLLSNAYASDRRWGDVSELRCFMKEKGVKKHSGNSWI 543
            ++  E  ++ L + DP N   YV+LSN YA   RW DV+ +R  M+++GVKK  G S I
Sbjct: 429 NIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSI 488

Query: 544 SIEGTVHEFLAGSPSHPQIGQILDILDELSMKMKL 648
            +EG V+ F+AG  +HPQ  +I    ++L  +MKL
Sbjct: 489 MVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKL 523



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 37/123 (30%), Positives = 64/123 (52%)
 Frame = +1

Query: 4   KDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRRL 183
           ++V S+  MI G A  G+  +A+ +F +M+D GL+P+  T + VL AC+  G L  GRR+
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267

Query: 184 FADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLHK 363
             D S        +      +D+  + GC+++A  +  +M  E     W +++AG   H 
Sbjct: 268 H-DFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME-ERTVVSWSAMIAGLAAHG 325

Query: 364 KLE 372
           + E
Sbjct: 326 RAE 328


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  216 bits (550), Expect = 3e-54
 Identities = 102/214 (47%), Positives = 146/214 (68%)
 Frame = +1

Query: 4   KDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRRL 183
           + VVS++ MI GLA++G+  +AL +F +M  +G+ P+  TF+G+L ACSH G +++GRR 
Sbjct: 206 RTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRF 265

Query: 184 FADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLHK 363
           FA M+  + + P++EHY C VDL SR+G ++EA E ++SMP +PNG VWG+LL GC +HK
Sbjct: 266 FASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHK 325

Query: 364 KLEYGENISKMLIRADPENSAGYVLLSNAYASDRRWGDVSELRCFMKEKGVKKHSGNSWI 543
            ++  E   K L   DP N   YV++SN YA   RW D + +R  MK++GVKK SG S I
Sbjct: 326 NIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSI 385

Query: 544 SIEGTVHEFLAGSPSHPQIGQILDILDELSMKMK 645
           ++ G VHEF+AG  +HPQ   I  I D+L +KMK
Sbjct: 386 TVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
            predicted protein [Populus trichocarpa]
          Length = 682

 Score =  213 bits (541), Expect = 4e-53
 Identities = 101/214 (47%), Positives = 141/214 (65%)
 Frame = +1

Query: 4    KDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRRL 183
            KD V +N  I GLA++G   DAL +F +M+  G+ PD  TF+G+LCAC+H+G +E+GRR 
Sbjct: 374  KDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRY 433

Query: 184  FADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVLHK 363
            F  M   F + P++EHY C VDLL R+GC+ EA +++ SMP E N  VWG+LL GC LH+
Sbjct: 434  FNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHR 493

Query: 364  KLEYGENISKMLIRADPENSAGYVLLSNAYASDRRWGDVSELRCFMKEKGVKKHSGNSWI 543
              +  E + K LI  +P +S  YVLLSN YA+  +W + +++R  M E+GVKK  G SWI
Sbjct: 494  DTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553

Query: 544  SIEGTVHEFLAGSPSHPQIGQILDILDELSMKMK 645
             ++G VH+FL G  SHP   +I   L EL+  +K
Sbjct: 554  EVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLK 587



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/118 (33%), Positives = 65/118 (55%)
 Frame = +1

Query: 4   KDVVSFNVMIMGLAINGEGHDALSMFFKMQDVGLIPDAGTFLGVLCACSHSGFLEKGRRL 183
           K++VS++ MI G A NG   +AL +FFKM + GL PD    +GVLC+C+  G LE G   
Sbjct: 273 KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWA 332

Query: 184 FADMSQHFFIYPKLEHYACYVDLLSRSGCIQEALEVVMSMPYEPNGFVWGSLLAGCVL 357
              ++ + F+   +   A  +D+ ++ G +  A EV   M  + +  VW + ++G  +
Sbjct: 333 SNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGM-RKKDRVVWNAAISGLAM 388


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