BLASTX nr result
ID: Angelica22_contig00028076
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00028076 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 dbj|BAH15073.1| cyclin D3 [Ipomoea batatas] 56 3e-06 emb|CAN88858.1| D3-type cyclin [Populus trichocarpa] 55 6e-06 >ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|222846001|gb|EEE83548.1| predicted protein [Populus trichocarpa] Length = 386 Score = 56.2 bits (134), Expect = 3e-06 Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Frame = -2 Query: 370 NELNFQSSSSQKKMACEQHTSPFLLDSLYCQEQHLEDNGDEY----QTLECKLEPLVLDQ 203 NELN Q EQ+ S FLLD+LYC+E ED +E T L PL L + Sbjct: 12 NELNSQQ---------EQNAS-FLLDALYCEEGRWEDESEEEVLQESTFVNDLFPLSLLE 61 Query: 202 NQDLFCXXXXXXXXXXXXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYS 23 QDLF N+ D + L +R++AVEWML+V+ HY Sbjct: 62 -QDLFWEDEELLSLFSKEQEQQASVSVNNVADDPF-----LSRARQEAVEWMLKVIAHYG 115 Query: 22 FSSLTAV 2 FS+LT++ Sbjct: 116 FSALTSI 122 >dbj|BAH15073.1| cyclin D3 [Ipomoea batatas] Length = 344 Score = 56.2 bits (134), Expect = 3e-06 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%) Frame = -2 Query: 358 FQSSSSQKKMACEQHTSPFLLDSLYCQEQHLEDN--------GDEYQTLECKLEPLVLDQ 203 F + SQK A E F D+L+C+E+ E++ D+Y + +PL+ Sbjct: 2 FPLTHSQKDQAFESRNPIFSPDALFCEEERFEEDVGGWSRFQTDDYAEISVLKKPLLTFL 61 Query: 202 NQDLFCXXXXXXXXXXXXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYS 23 DLF E ++ C D + + +L +R +AV+WML+V+RHY Sbjct: 62 ESDLF---------WEDDELLALLSKEKDIGCVDLDQSLML--ARNEAVDWMLKVIRHYG 110 Query: 22 FSSLTAV 2 F++LTAV Sbjct: 111 FNALTAV 117 >emb|CAN88858.1| D3-type cyclin [Populus trichocarpa] Length = 347 Score = 55.1 bits (131), Expect = 6e-06 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%) Frame = -2 Query: 322 EQHTSPFLLDSLYCQEQHLEDNGDEY----QTLECKLEPLVLDQNQDLFCXXXXXXXXXX 155 ++ + FLLD+LYC+E ED +E T L PL L + QDLF Sbjct: 6 QEQNASFLLDALYCEEGRWEDESEEEVLQESTFVNDLFPLSLLE-QDLFWEDEELLSLFS 64 Query: 154 XXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYSFSSLTAV 2 N+ D + L +R++AVEWML+V+ HY FS+LT++ Sbjct: 65 KEQEQQASVSVNNVADDPF-----LSRARQEAVEWMLKVIAHYGFSALTSI 110