BLASTX nr result

ID: Angelica22_contig00028076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028076
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]                            56   3e-06
emb|CAN88858.1| D3-type cyclin [Populus trichocarpa]                   55   6e-06

>ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|222846001|gb|EEE83548.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
 Frame = -2

Query: 370 NELNFQSSSSQKKMACEQHTSPFLLDSLYCQEQHLEDNGDEY----QTLECKLEPLVLDQ 203
           NELN Q          EQ+ S FLLD+LYC+E   ED  +E      T    L PL L +
Sbjct: 12  NELNSQQ---------EQNAS-FLLDALYCEEGRWEDESEEEVLQESTFVNDLFPLSLLE 61

Query: 202 NQDLFCXXXXXXXXXXXXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYS 23
            QDLF                       N+  D +     L  +R++AVEWML+V+ HY 
Sbjct: 62  -QDLFWEDEELLSLFSKEQEQQASVSVNNVADDPF-----LSRARQEAVEWMLKVIAHYG 115

Query: 22  FSSLTAV 2
           FS+LT++
Sbjct: 116 FSALTSI 122


>dbj|BAH15073.1| cyclin D3 [Ipomoea batatas]
          Length = 344

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
 Frame = -2

Query: 358 FQSSSSQKKMACEQHTSPFLLDSLYCQEQHLEDN--------GDEYQTLECKLEPLVLDQ 203
           F  + SQK  A E     F  D+L+C+E+  E++         D+Y  +    +PL+   
Sbjct: 2   FPLTHSQKDQAFESRNPIFSPDALFCEEERFEEDVGGWSRFQTDDYAEISVLKKPLLTFL 61

Query: 202 NQDLFCXXXXXXXXXXXXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYS 23
             DLF                     E ++ C D + + +L  +R +AV+WML+V+RHY 
Sbjct: 62  ESDLF---------WEDDELLALLSKEKDIGCVDLDQSLML--ARNEAVDWMLKVIRHYG 110

Query: 22  FSSLTAV 2
           F++LTAV
Sbjct: 111 FNALTAV 117


>emb|CAN88858.1| D3-type cyclin [Populus trichocarpa]
          Length = 347

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
 Frame = -2

Query: 322 EQHTSPFLLDSLYCQEQHLEDNGDEY----QTLECKLEPLVLDQNQDLFCXXXXXXXXXX 155
           ++  + FLLD+LYC+E   ED  +E      T    L PL L + QDLF           
Sbjct: 6   QEQNASFLLDALYCEEGRWEDESEEEVLQESTFVNDLFPLSLLE-QDLFWEDEELLSLFS 64

Query: 154 XXXXXXXXXXEMNLVCDDYENNSVLVESRRDAVEWMLRVVRHYSFSSLTAV 2
                       N+  D +     L  +R++AVEWML+V+ HY FS+LT++
Sbjct: 65  KEQEQQASVSVNNVADDPF-----LSRARQEAVEWMLKVIAHYGFSALTSI 110


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