BLASTX nr result

ID: Angelica22_contig00028069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00028069
         (2302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein [Ara...    77   2e-11
ref|XP_002313812.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-11
ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]...    74   2e-10
ref|XP_004147743.1| PREDICTED: uncharacterized protein LOC101213...    71   1e-09
ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [S...    69   6e-09

>ref|XP_002873637.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297319474|gb|EFH49896.1| zinc knuckle
            (CCHC-type) family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 397

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
 Frame = -2

Query: 2007 CFKCKKLGHFAIRCPQNMAYKSRLFSSASVFVEEDGLEYAPPTLICQCGLR-CSL---GT 1840
            CF+C++ GH+   CP     KS+         ++D     PP + C CG   C +    T
Sbjct: 6    CFRCRQAGHWISDCP----LKSK--------TDDD----PPPAIHCTCGGGFCEIKVANT 49

Query: 1839 RKKTSRKAYACPL-KSCKTFRWEDEVKKDEL-----ISVPRCLCRAGFCRQYTESGGTEV 1678
            R+   RK Y CP  ++CK F+W D+V  +++      ++P C C AG CR+  +  G   
Sbjct: 50   RENPGRKFYKCPTAQNCKFFKWCDKVTDEDIRFRPAFTIPICSCGAGPCRRVKDVSG--- 106

Query: 1677 GRKYFACPIKKGQGACTFFK 1618
             R Y  C IK+G GAC FFK
Sbjct: 107  -RAYLICCIKEGFGACGFFK 125


>ref|XP_002313812.1| predicted protein [Populus trichocarpa] gi|222850220|gb|EEE87767.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
 Frame = -2

Query: 2007 CFKCKKLGHFAIRCPQNMAYKSRLFS---SASVFVEEDGLEYAPPTLICQCGL-RCSLGT 1840
            CF CK+LGH++  CP     KS   S   S+S  V+   L    P + C CG   C + T
Sbjct: 39   CFMCKRLGHWSKDCPNKTPRKSLALSPGSSSSTSVQVPDL----PVVRCPCGGGTCRVST 94

Query: 1839 R---KKTSRKAYACPLK-----SCKTFRWEDEVKKDELISVPRCLCRAGFCRQYTESGGT 1684
                K   RK YACP+      SC  F+W D++        P C C AG C     S G 
Sbjct: 95   SNTVKNPGRKFYACPVDQRTSGSCGFFKWSDDIAAR--FKPPMCPCGAGSCSLNIVSSGP 152

Query: 1683 EVGRKYFACPIKKGQGACTFFKLLNDESLTNNRHVDARISPCRFTIGNCSDTFPANNVQK 1504
            + GR YFAC IKK    CT           +N+  D  +     T+    D +P +++  
Sbjct: 153  DRGRWYFACRIKK----CT----------EDNKSSDIELES---TMVKSVDNYPISSMDP 195

Query: 1503 EIRSN---VLDTVEYYPNQREISGNQEVE----LMELDLGCEEDTLNKTLRKCNKRLRDG 1345
             IR +   V D V       EI     +E    + + ++ C+E   +  +        +G
Sbjct: 196  PIRKDEVLVRDLVMQDSESCEIVAGTALEVPPPIPKPEIPCQEPEFSLQISNARDTKIEG 255

Query: 1344 A 1342
            A
Sbjct: 256  A 256



 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
 Frame = -2

Query: 894 SDQFARVARDLQNKLISLLKSSDFRAHDYMAREANITFTALDQLQVQSRTFCERVNKLIR 715
           SD+     +     L+++L+S D   H+ M + A  TF  L  L +   TF + V + I 
Sbjct: 297 SDKSKLALKTFGQGLLAILQSMDQTQHETMLKVAENTFDTLRHLSIDYATFSKAVREYIE 356

Query: 714 SASILDKAEGFIIPKDQSYNDCQDHYYSKKRKRDDLISDYDVAKADMETCKGQFHSLSEK 535
             S L   E  +  ++ S  +   HYY KK + D++   +  A +  E  +    SL  +
Sbjct: 357 CKSKLAGIEESM-GEEFSREEFLGHYYDKKTRFDNISQRHVEAVSAYEASENHLQSLRVE 415

Query: 534 ASCQQIRLFQVDARVSSCEAENKYHEARCAQISVDLIESEKQLQVA----EEDLRLLQQK 367
            S  +  L +++ ++S CEAE    ++   +IS    ESE+ L  A    EE L+L  ++
Sbjct: 416 VSRVKNMLLELEKQLSFCEAETLRCKSCVTEISNHKSESERSLDAACEKMEEALKLEDER 475

Query: 366 KEEYNAAEASYKKARVEL 313
                A  A+ + ARV+L
Sbjct: 476 DSLVYAVNAALENARVQL 493


>ref|NP_196896.1| endonuclease VIII-like 3 [Arabidopsis thaliana]
            gi|10177658|dbj|BAB11120.1| unnamed protein product
            [Arabidopsis thaliana] gi|332004577|gb|AED91960.1|
            endonuclease VIII-like 3 [Arabidopsis thaliana]
          Length = 415

 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
 Frame = -2

Query: 2007 CFKCKKLGHFAIRCPQNMAYKSRLFSSASVFVEEDGLEYAPPTLICQCGLR-CSL---GT 1840
            CF+C++ GH+   CP                  +   +  PP + C CG   C +    T
Sbjct: 11   CFRCRQAGHWINDCPL-----------------KSYTDDPPPAIQCPCGGGFCEIKVANT 53

Query: 1839 RKKTSRKAYACPL-KSCKTFRWEDEVKKDEL-----ISVPRCLCRAGFCRQYTESGGTEV 1678
            R+   RK Y CP  ++C  F+W D+V  +++      ++P C C AG CR+  +  G   
Sbjct: 54   RENPGRKFYKCPTAQNCCFFKWCDKVTDEDIKFRPAFTIPICSCGAGPCRRVKDVSG--- 110

Query: 1677 GRKYFACPIKKGQGACTFFK 1618
             R Y  C IKKG GAC FFK
Sbjct: 111  -RAYLICCIKKGFGACGFFK 129


>ref|XP_004147743.1| PREDICTED: uncharacterized protein LOC101213376 [Cucumis sativus]
            gi|449516453|ref|XP_004165261.1| PREDICTED:
            uncharacterized protein LOC101228208 [Cucumis sativus]
          Length = 327

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
 Frame = -2

Query: 2010 ACFKCKKLGHFAIRCPQNMAYKSRLFSSASVFVEEDGLEYAPPTLICQCGLR-CSL---G 1843
            +CFKC KLGH+A  C       S  FSS+       G + + P   C CG   CS+    
Sbjct: 92   SCFKCGKLGHWARDCDAPGGGGS--FSSS-------GNDMSVPDKACPCGSGICSVLTAN 142

Query: 1842 TRKKTSRKAYACPLKS----CKTFRWEDEVKKDELISVP------------RCLCRAGFC 1711
            T +   RK Y CP++     C  F W D      ++S              +C C AG C
Sbjct: 143  TERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQNPLSSSFSDLQCPCGAGSC 202

Query: 1710 RQYTESGGTEVGRKYFACPIKKGQGACTFFKLLNDESL-TNNRHVDARISPCRFTIGNCS 1534
            +  T   G  VG++++ CP    Q +C FF+   + S+ T N+    ++       GN +
Sbjct: 203  KILTAKTGNNVGKQFYCCP--SSQASCRFFRWCEEPSMETKNQESTPKV------YGNTN 254

Query: 1533 DT 1528
            DT
Sbjct: 255  DT 256


>ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
            gi|241917628|gb|EER90772.1| hypothetical protein
            SORBIDRAFT_01g005940 [Sorghum bicolor]
          Length = 366

 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 51/179 (28%), Positives = 72/179 (40%), Gaps = 27/179 (15%)
 Frame = -2

Query: 2016 SYACFKCKKLGHFAIRCPQNMAYKSRL--------FSSASVFVEEDGLEYAPPTLICQCG 1861
            S ACFKC   GH+A  CPQ++              + +A + VE+           C CG
Sbjct: 93   SGACFKCGDPGHWARDCPQSVPNTGGGGQIGVGGGYVNADMKVEDKA---------CPCG 143

Query: 1860 LRCSL----GTRKKTSRKAYACPLKS--CKTFRWEDE-------------VKKDELISVP 1738
                L     T K   RK Y CP +   C  F W D              +  +   +  
Sbjct: 144  AGTCLVLTSNTLKNPGRKFYKCPTRDGGCNFFEWCDAPSPAPANARNNMVLHSETSATDM 203

Query: 1737 RCLCRAGFCRQYTESGGTEVGRKYFACPIKKGQGACTFFKLLNDESLTNNRHVDARISP 1561
             C C AG C   T   G  VGR++F CP+ +G G+C FFK  +++       +  + SP
Sbjct: 204  LCPCGAGTCLILTTKTGKNVGRQFFRCPLNQGGGSCGFFKWCDEQQPRVGAPLQQQASP 262


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