BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027960
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    69   3e-13
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    77   3e-12
gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. ...    74   2e-11
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    63   8e-11
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               71   1e-10

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 68.9 bits (167), Expect(2) = 3e-13
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
 Frame = -2

Query: 423 KVSFITWLALKNRLLTKDRMISFGMPVDPNCLLCGLNAESVHHMYSSCPYYDLIRRSLPF 244
           K +F  WLA+ NRL T DRM  + M VD  C+LC    ES  H++ SCP+   I   L  
Sbjct: 317 KHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPLAK 376

Query: 243 D-----FVDDWSRCQNGDMCTSSMSSKKRKIACLFFTVAVYSMWKERNFRMHNSGPGHPT 79
                 F  DW    N ++  +        +A     V +Y++W+ERN R H + P + +
Sbjct: 377 TIYNTCFYTDWQTIIN-NVSRNWPDRIAGFLARCILQVTIYTLWRERNERKHGASP-NSS 434

Query: 78  SVIICEIMRMVREKL 34
           S +I  I + +R  L
Sbjct: 435 SRLISWIDKHIRNHL 449



 Score = 31.2 bits (69), Expect(2) = 3e-13
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = -3

Query: 554 SSDLITWDGIQHNRIKISL----IWNSFRTVGNNVACFDFVWGSFSIPK 420
           + D   W G + NR +        WN  RTV N VA +  VW + +IPK
Sbjct: 270 AEDRALWKG-KENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPK 317


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
 Frame = -2

Query: 423 KVSFITWLALKNRLLTKDRMISFGMPVDPNCLLCGLNAESVHHMYSSCPY-----YDLIR 259
           K SFITWLA KNRL T DRM+S+   V+ +C+ C    E+ +H++ +C Y       L  
Sbjct: 287 KYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTS 346

Query: 258 RSLPFDFVDDWSRCQNGDMCTSSMSSKKRKIACLFFTVAVYSMWKERNFRMHNSGPGHPT 79
           + L   +  DW+      +   ++ + +  +    F + VYS+WKERN R H   P  P+
Sbjct: 347 KLLTRHYSTDWTTILK-LLTDKTLGNNRLFLLRYAFQILVYSIWKERNSRRHGEEP-LPS 404

Query: 78  SVIICEIMRMVREKL 34
           ++++  + + VR KL
Sbjct: 405 ALLLKRLDKEVRNKL 419


>gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
 Frame = -2

Query: 423 KVSFITWLALKNRLLTKDRMISFGMPVDPNCLLCGLNAESVHHMYSSCPY-----YDLIR 259
           K +F TWL  KNR+ T DRMI +   VD +C+ C  + E+  HM+ +CPY      +L+ 
Sbjct: 53  KYAFFTWLVAKNRIATGDRMIKWNQNVDASCVFCKDSRETKDHMFFNCPYSRTVWKELVS 112

Query: 258 RSLPFDFVDDWSRCQNGDMCTSSMSSKKRKIACLFFTVAVYSMWKERNFRMHNSGPGHPT 79
             L  +F + W       +    +   K  I    F   ++S+W+ERN R H   P  PT
Sbjct: 113 GLLLNNFTEKWLEIMT-MLAKKDLDKTKGFIVRYVFQNTIHSIWRERNDRRHGEQPS-PT 170

Query: 78  SVII 67
             I+
Sbjct: 171 EKIV 174


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 62.8 bits (151), Expect(2) = 8e-11
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
 Frame = -2

Query: 423 KVSFITWLALKNRLLTKDRMISFGMPVDPNCLLCGLNAESVHHMYSSCPYYDLI-----R 259
           K  F TWLAL+NRL T  RM  +    D  C  C  + E+  H++ SC Y   I     +
Sbjct: 474 KYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIAK 533

Query: 258 RSLPFDFVDDWSRCQNGDMCTSSMSSKKRK-IACLFFTVAVYSMWKERNFRMHNSGPGHP 82
             L   F  DW    N    + + + + R  ++   F + V+++WKERN R H   P   
Sbjct: 534 NVLQHRFSTDWQTIVN--YISETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGEEPRTS 591

Query: 81  TSVI 70
            ++I
Sbjct: 592 ANLI 595



 Score = 29.3 bits (64), Expect(2) = 8e-11
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
 Frame = -3

Query: 587 VRKKVSSVQILSSDLITWDG---IQHNRIKISLIWNSFRTVGNNVACFDFVWGSFSIPK 420
           + +K  +  +L  D   W G   +          WN  R   N VA +  VW S S PK
Sbjct: 416 LNQKYQTRNLLREDATLWRGKGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPK 474


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
 Frame = -2

Query: 423  KVSFITWLALKNRLLTKDRMISFGMPVDPNCLLCGLNAESVHHMYSSCPY----YDLIRR 256
            K +FI W+   NRL T+DR+  +G  + P C+LC    ES  H++  C +    +    R
Sbjct: 998  KQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSSEIWSFFMR 1057

Query: 255  SLPFDFVDDWSRCQNGDMCTSSMSSKKRKIACLFFTVAVYSMWKERNFRMHNSGPGHPTS 76
            +L  +    +  C    + T+S       I  L F  +VY +W+ERN R+H S    P  
Sbjct: 1058 ALNLNPPPQFMHCLLWTL-TASRDRNITLITKLLFHASVYFIWRERNLRIH-SNSVRPAH 1115

Query: 75   VIICEIMRMVREKL 34
            +II EI  +VR +L
Sbjct: 1116 LIIKEIQLIVRARL 1129