BLASTX nr result

ID: Angelica22_contig00027949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027949
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001781630.1| predicted protein [Physcomitrella patens sub...   126   2e-27
ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group] g...   125   5e-27
gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase fami...   125   5e-27
ref|XP_002980959.1| hypothetical protein SELMODRAFT_178562 [Sela...   125   5e-27
ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [S...   125   5e-27

>ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666944|gb|EDQ53586.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1072

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLIRPV 182
           LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVL +PV
Sbjct: 626 LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLTKPV 685

Query: 183 EIQAGG 200
           EIQ GG
Sbjct: 686 EIQIGG 691


>ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
           gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 42
           gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza
           sativa Japonica Group] gi|37806159|dbj|BAC99664.1|
           putative RNA helicase [Oryza sativa Japonica Group]
           gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa
           Japonica Group] gi|218200507|gb|EEC82934.1| hypothetical
           protein OsI_27901 [Oryza sativa Indica Group]
           gi|222639953|gb|EEE68085.1| hypothetical protein
           OsJ_26125 [Oryza sativa Japonica Group]
          Length = 1049

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLIRPV 182
           LRRVT+LVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVE+LARKVL +PV
Sbjct: 572 LRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPV 631

Query: 183 EIQAGG 200
           EIQ GG
Sbjct: 632 EIQVGG 637


>gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 1065

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLIRPV 182
           LRRVT+LVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVE+LARKVL +PV
Sbjct: 588 LRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPV 647

Query: 183 EIQAGG 200
           EIQ GG
Sbjct: 648 EIQVGG 653


>ref|XP_002980959.1| hypothetical protein SELMODRAFT_178562 [Selaginella moellendorffii]
           gi|302815225|ref|XP_002989294.1| hypothetical protein
           SELMODRAFT_129703 [Selaginella moellendorffii]
           gi|300142872|gb|EFJ09568.1| hypothetical protein
           SELMODRAFT_129703 [Selaginella moellendorffii]
           gi|300151498|gb|EFJ18144.1| hypothetical protein
           SELMODRAFT_178562 [Selaginella moellendorffii]
          Length = 539

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLIRPV 182
           LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVE+LARKVL +PV
Sbjct: 70  LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVELLARKVLDKPV 129

Query: 183 EIQAGG 200
           EIQ GG
Sbjct: 130 EIQVGG 135


>ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
           gi|241941451|gb|EES14596.1| hypothetical protein
           SORBIDRAFT_07g004090 [Sorghum bicolor]
          Length = 1062

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/66 (92%), Positives = 64/66 (96%)
 Frame = +3

Query: 3   LRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLIRPV 182
           LRRVT+LVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVE+LARKVL +PV
Sbjct: 585 LRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPV 644

Query: 183 EIQAGG 200
           EIQ GG
Sbjct: 645 EIQVGG 650


Top