BLASTX nr result

ID: Angelica22_contig00027918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027918
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17585.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   130   1e-28
ref|XP_002866749.1| hypothetical protein ARALYDRAFT_920064 [Arab...   125   3e-27
ref|NP_001119513.1| pentatricopeptide repeat-containing protein ...   124   6e-27

>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = -3

Query: 293 LVSKMIRNFRSAETAWQFFSWVSYQPG-FCHNVYTMSRMITKLARDGKVNLVDQLLFKIK 117
           LV K++RNF S ETAW+FF WV+YQPG F HN+YT+ RM+T LAR G V LV++LL KI+
Sbjct: 349 LVCKILRNFNSPETAWKFFCWVAYQPGGFNHNIYTVQRMMTLLARHGHVELVEKLLLKIR 408

Query: 116 REEIKLSFSTIKLIIDFYGISGNGESALKVFQGAKTLC 3
           REEI+L  STI+LIIDFYGIS N ++ALKVF  A++LC
Sbjct: 409 REEIRLPVSTIRLIIDFYGISRNADAALKVFHDAESLC 446


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/98 (65%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
 Frame = -3

Query: 293 LVSKMIRNFRSAETAWQFFSWVSYQPG-FCHNVYTMSRMITKLARDGKVNLVDQLLFKIK 117
           LV K++RNF S ETAW+FF WV+YQPG F HN+YT+ RM+T LAR G V LV++LL KI+
Sbjct: 373 LVCKILRNFNSPETAWKFFCWVAYQPGGFNHNIYTVQRMMTLLARHGHVELVEKLLLKIR 432

Query: 116 REEIKLSFSTIKLIIDFYGISGNGESALKVFQGAKTLC 3
           REEI+L  STI+LIIDFYGIS N ++ALKVF  A++LC
Sbjct: 433 REEIRLPVSTIRLIIDFYGISRNADAALKVFHDAESLC 470


>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/97 (63%), Positives = 78/97 (80%)
 Frame = -3

Query: 293 LVSKMIRNFRSAETAWQFFSWVSYQPGFCHNVYTMSRMITKLARDGKVNLVDQLLFKIKR 114
           LV K++RNF S ETAW FF WV+YQPGF H+VYT+ RM+T LAR GKV LVD+L+ KI+ 
Sbjct: 377 LVCKVLRNFSSPETAWYFFCWVAYQPGFTHDVYTVQRMMTLLARHGKVELVDKLITKIRI 436

Query: 113 EEIKLSFSTIKLIIDFYGISGNGESALKVFQGAKTLC 3
           E ++L FSTI+LIIDFYGIS N ++ALKVF+  + LC
Sbjct: 437 EGMRLPFSTIRLIIDFYGISKNADAALKVFRDDRPLC 473


>ref|XP_002866749.1| hypothetical protein ARALYDRAFT_920064 [Arabidopsis lyrata subsp.
           lyrata] gi|297312584|gb|EFH43008.1| hypothetical protein
           ARALYDRAFT_920064 [Arabidopsis lyrata subsp. lyrata]
          Length = 661

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/97 (60%), Positives = 76/97 (78%)
 Frame = -3

Query: 293 LVSKMIRNFRSAETAWQFFSWVSYQPGFCHNVYTMSRMITKLARDGKVNLVDQLLFKIKR 114
           LV KM+RNFRS ETAW FF WV+ QPGF H+ YT+ RM+  LAR+G+V LVD+L+ K++ 
Sbjct: 380 LVCKMLRNFRSPETAWSFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRM 439

Query: 113 EEIKLSFSTIKLIIDFYGISGNGESALKVFQGAKTLC 3
           E IKL FSTI+LIID YGIS   ++A+KVF+  +TLC
Sbjct: 440 EGIKLPFSTIRLIIDLYGISKKPDAAIKVFRQDRTLC 476


>ref|NP_001119513.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635653|sp|B3H4P1.1|PP450_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g66631 gi|332010859|gb|AED98242.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 661

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/97 (60%), Positives = 75/97 (77%)
 Frame = -3

Query: 293 LVSKMIRNFRSAETAWQFFSWVSYQPGFCHNVYTMSRMITKLARDGKVNLVDQLLFKIKR 114
           LV KM+RNFR+ ETAW FF WV+ QPGF H+ YT+ RM+  LAR+G+V LVD+L+ K++ 
Sbjct: 380 LVCKMLRNFRAPETAWSFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRI 439

Query: 113 EEIKLSFSTIKLIIDFYGISGNGESALKVFQGAKTLC 3
           E IKL FSTI+LIID YGIS   E+A+KVF   +TLC
Sbjct: 440 EGIKLPFSTIRLIIDLYGISKKPEAAIKVFNEDRTLC 476


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