BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027762
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   133   2e-29
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc...   131   5e-29
gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-...   131   5e-29
gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-...   131   5e-29
gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group...   131   5e-29

>gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
            gi|108709997|gb|ABF97792.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1177

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    GYSTIGCKWVFKRKMNPDGSIDKYKARLVAKGFKQKEGIDYFDTYSPVARMTTIRMLVAL 182
            GY  +GCKWVFK+K+ PDG+I+KYKARLVAKG+ QKEG D+FDTYSPVAR+TTIR+L++L
Sbjct: 756  GYKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 815

Query: 183  ASVHGLIIPQMDVKTTFLHGEL 248
            A+ HGL++ QMDVKT FL+GEL
Sbjct: 816  AASHGLLVHQMDVKTAFLNGEL 837


>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1805

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    GYSTIGCKWVFKRKMNPDGSIDKYKARLVAKGFKQKEGIDYFDTYSPVARMTTIRMLVAL 182
            G   +GCKWVFK+K+ PDG+I+KYKARLVAKG+ QKEG D+FDTYSPVAR+TTIR+L++L
Sbjct: 1316 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 1375

Query: 183  ASVHGLIIPQMDVKTTFLHGEL 248
            A+ HGL++ QMDVKTTFL+GEL
Sbjct: 1376 AASHGLLVHQMDVKTTFLNGEL 1397


>gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549030|gb|ABA91827.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 527

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +3

Query: 3   GYSTIGCKWVFKRKMNPDGSIDKYKARLVAKGFKQKEGIDYFDTYSPVARMTTIRMLVAL 182
           G   +GCKWVFK+K+ PDG+I+KYKARLVAKG+ QKEG D+FDTYSPVAR+TTIR+L++L
Sbjct: 126 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 185

Query: 183 ASVHGLIIPQMDVKTTFLHGEL 248
           A+ HGL++ QMDVKTTFL+GEL
Sbjct: 186 AASHGLLVHQMDVKTTFLNGEL 207


>gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549882|gb|ABA92679.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1302

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    GYSTIGCKWVFKRKMNPDGSIDKYKARLVAKGFKQKEGIDYFDTYSPVARMTTIRMLVAL 182
            G   +GCKWVFK+K+ PDG+I+KYKARLVAKG+ QKEG D+FDTYSPVAR+TTIR+L++L
Sbjct: 831  GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 890

Query: 183  ASVHGLIIPQMDVKTTFLHGEL 248
            A+ HGL++ QMDVKTTFL+GEL
Sbjct: 891  AASHGLLVHQMDVKTTFLNGEL 912


>gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|55168291|gb|AAV44157.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1046

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +3

Query: 3   GYSTIGCKWVFKRKMNPDGSIDKYKARLVAKGFKQKEGIDYFDTYSPVARMTTIRMLVAL 182
           G   +GCKWVFK+K+ PDG+I+KYKARLVAKG+ QKEG D+FDTYSPVAR+TTIR+L++L
Sbjct: 575 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 634

Query: 183 ASVHGLIIPQMDVKTTFLHGEL 248
           A+ HGL++ QMDVKTTFL+GEL
Sbjct: 635 AASHGLLVHQMDVKTTFLNGEL 656