BLASTX nr result

ID: Angelica22_contig00027697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027697
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79757.1|AC009317_16 T30E16.23 [Arabidopsis thaliana]             57   2e-06
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9...    57   2e-06
ref|ZP_08692275.1| cell surface protein [Fusobacterium sp. D12] ...    57   2e-06
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|...    56   3e-06
ref|ZP_08599365.1| cell surface protein [Fusobacterium sp. 11_3_...    55   6e-06

>gb|AAF79757.1|AC009317_16 T30E16.23 [Arabidopsis thaliana]
          Length = 1076

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
 Frame = -1

Query: 418 PAFGHSNHFGYDILAGGIAVPPFEHTGNHSYPYGYPATGGGNSTSPF--KYSYPFGFNPA 245
           P FG +N  G+    GG + P F  +   ++        G +ST  F    S  FG +PA
Sbjct: 192 PGFGATNTTGF----GGSSTPGFGASSTPAFGSTNTPAFGASSTPLFGSSSSPAFGASPA 247

Query: 244 -AFGHSSHPFGFAPSNVG-----SSAPAFAQSHPFGF----TPNNGGSSAPAFGHNSSPF 95
            AFG S + FG    + G     SS P F  S+   F    +P+    S+PAFG ++S F
Sbjct: 248 PAFGSSGNAFGNNTFSSGGAFGSSSTPTFGASNTSAFGASSSPSFNFGSSPAFGQSTSAF 307

Query: 94  GFNPTNGGTSATTLGQRNSFGFTPGGTSV 8
           G +      S +T G +++ G   GG+ V
Sbjct: 308 GSSSFGAQASTSTFGGQSTIGGQQGGSRV 336


>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
           [Glycine max]
          Length = 1010

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 49/145 (33%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
 Frame = -1

Query: 418 PAFGHSNHFGYDILAGGIAVPPFEHTGNHSYPYGYPATGGGNSTSPFKYSYPFGFNPAAF 239
           PAFG ++   +    G  + P F  TG+       P  G G +            + +AF
Sbjct: 207 PAFGATSAPAF----GSTSTPAFGSTGSAFGVSSTPVFGSGGAFGASSNPMFGSSSTSAF 262

Query: 238 GHSSHPFGFA--PSNVGSSAPAFAQSHPFGFTPNNGGSSAPAFGHNS------SPFGFNP 83
           G SS PFG    P+   SS PAF+    FG TP   G S+ AFG++S      SPFG + 
Sbjct: 263 GTSSSPFGATSTPAFGASSTPAFS----FGSTPQAFGQSSSAFGNSSPFGSTASPFGGSQ 318

Query: 82  TNGGTSATTLGQRNSFGFTPGGTSV 8
           T   T   T GQ    G   GG+ V
Sbjct: 319 TPTSTFGNTGGQSGFGGQQRGGSRV 343


>ref|ZP_08692275.1| cell surface protein [Fusobacterium sp. D12]
           gi|421499827|ref|ZP_15946855.1| YadA-like C-terminal
           domain protein [Fusobacterium necrophorum subsp.
           funduliforme Fnf 1007] gi|313686254|gb|EFS23089.1| cell
           surface protein [Fusobacterium sp. D12]
           gi|402269285|gb|EJU18625.1| YadA-like C-terminal domain
           protein [Fusobacterium necrophorum subsp. funduliforme
           Fnf 1007]
          Length = 1079

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
 Frame = -1

Query: 469 FGHDHATKQNFSSGDLFPAFGHSNHFGYDILAGGIAVPPFEHTGNHSYPYGYPATGGGNS 290
           FGHD+    +           HS+ FG+   A G     F +T N +  +   A G GN 
Sbjct: 365 FGHDNEATND-----------HSSAFGFKNTAEGDYSSAFGNT-NTATKHASSAFGYGNK 412

Query: 289 TSPFKYSYPFGFNPAAFGHSSHPFGFAPSNVGSSAPAFAQSHP--------FGFTPNNGG 134
               + S  FGF   A G +S  FG+  +  G  + AF  S+         FG     GG
Sbjct: 413 AQK-ENSSAFGFENTASGINSSAFGYKNTASGKRSAAFGNSNEADGEDSFAFGRGNRAGG 471

Query: 133 SSAPAFGH-------NSSPFGFNPTNGGTSATTLGQRNS 38
           +++ AFG+       NSS FG N T  G SA+  G +NS
Sbjct: 472 TNSFAFGYVNKANSFNSSAFGINNTVDGNSASAFGYKNS 510


>ref|XP_002518957.1| transporter, putative [Ricinus communis]
           gi|223541944|gb|EEF43490.1| transporter, putative
           [Ricinus communis]
          Length = 957

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
 Frame = -1

Query: 436 SSGDLFPAFGHSNH--FGYDILAGGIAV----PPFEHTGN--HSYPYG------YPATGG 299
           S G   PAFG S+   FG     GG +V    P F   G+   + P+G       PA G 
Sbjct: 24  SFGGSVPAFGASSSPSFGSSSSFGGSSVFGQKPAFGAFGSATQTSPFGSTSQQSQPAFGS 83

Query: 298 G--NSTSPFKYSYPFGFNPAAFGHSSHPFGF----APSNVGSSAPAFAQSHPFGF----T 149
           G   ST+PF  S     +  AFG +S+P GF    AP+   SSAP+F  +   GF    T
Sbjct: 84  GLFGSTTPFGTS-----SQPAFGAASNP-GFGSTSAPAFGASSAPSFGANSTLGFGANST 137

Query: 148 PNNGGSSAPAFGHNSSPFGFNPTN--------GGTSATTLGQRNSFGFTPGGTSVP 5
           P+ G +S P FG  +S FG + +         G +SA   G   S GF   G S P
Sbjct: 138 PSFGFTSTPTFGSTASAFGVSSSPVFGSGAGFGSSSAPVFGTSGSSGF---GASSP 190


>ref|ZP_08599365.1| cell surface protein [Fusobacterium sp. 11_3_2]
           gi|336164103|gb|EGN67015.1| cell surface protein
           [Fusobacterium sp. 11_3_2]
          Length = 601

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
 Frame = -1

Query: 475 GGFGHDH--ATKQNFSSGDLFPAFGHSNHFGYDILAGGIAVPPFEHTGNHSYPYGYPATG 302
           GG G D   A   N +SG+   AFG++N                + +G  S  +GY    
Sbjct: 30  GGAGTDSTVAGVDNEASGENSSAFGYNN----------------KTSGFSSSAFGYNNKT 73

Query: 301 GGNSTSPFKY-SYPFGFNPAAFGHSSHPFGFAPSNVGSSAPAFAQ-SHPFGFTPNNGGSS 128
            G  +S F + +   GF+  AFG  +   GF  S  G +  A  + S  FGF    GG +
Sbjct: 74  SGKDSSAFGFWNEASGFDSVAFGFQNKASGFVSSAFGHNNKASGEWSSAFGFDNRAGGKN 133

Query: 127 APAFGH-------NSSPFGFNPTNGGTSATTLGQR 44
             AFG+       NSS FGF    GG + +  G +
Sbjct: 134 GSAFGYQNTANGENSSAFGFGNRAGGKNGSAFGSQ 168


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