BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027490
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   137   1e-30
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   133   2e-29
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   133   2e-29
gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]        132   3e-29
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   132   6e-29

>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  137 bits (346), Expect = 1e-30
 Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
 Frame = -3

Query: 505 SSILSSTISHPGTVLITITLIEQNYNQWHRSMKIALSSKLKLGFVDGSCVKPVNSENQLL 326
           S +      HPG  LI++ L   NY+ W+ +MKIAL +K K+GFVDG+  +P  S+    
Sbjct: 13  SPLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFR 72

Query: 325 LWNCCNDIVISWILNTVSPEIKLSVMYMTVAKDVWDDFALRFAQTNVPKMFNLRKELSSL 146
           LW+ CN +V SW+LN+VSP+I  S++ +  A D+W D   RF  TN+P+ FNL +E+  L
Sbjct: 73  LWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRDLHGRFHMTNLPRTFNLTQEIQDL 132

Query: 145 NQGNLSISAYFTKFRTLSDELDVLS--DIPRCDCGKCTYDNNAKLEK 11
            QG++S+S Y+T  +TL D L+ +   D P C CG     N  KL+K
Sbjct: 133 KQGSMSLSDYYTTLKTLWDNLESVDEPDTP-CVCG-----NAEKLQK 173


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
 Frame = -3

Query: 478 HPGTVLITITLIEQNYNQWHRSMKIALSSKLKLGFVDGSCVKPVNSENQLLLWNCCNDIV 299
           HPG  +I+  L E  Y  W  +M+I+L +K KLGFVDGS  +P+ S+    LW+ CN +V
Sbjct: 73  HPGLSIISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMV 132

Query: 298 ISWILNTVSPEIKLSVMYMTVAKDVWDDFALRFAQTNVPKMFNLRKELSSLNQGNLSISA 119
            SW+LN+VSP+I  S++ +  A D+W D   RF  TN+P+ +NL +E+  L QG +S+S 
Sbjct: 133 KSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSE 192

Query: 118 YFTKFRTLSDELDVLSDI-PRCDCGKCT----YDNNAKLEKF 8
           Y+T  +TL D+LD    +   C CGK          AK+ KF
Sbjct: 193 YYTLLKTLWDQLDSTEALDDPCTCGKAVRLYQKAEKAKIMKF 234


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  133 bits (335), Expect = 2e-29
 Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
 Frame = -3

Query: 478 HPGTVLITITLIEQNYNQWHRSMKIALSSKLKLGFVDGSCVKPVNSENQLLLWNCCNDIV 299
           HPG  +I+  L E NY  W  +M I+L +K K GF+DG+  +P+ S+    LW+ CN +V
Sbjct: 69  HPGLNIISHRLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMV 128

Query: 298 ISWILNTVSPEIKLSVMYMTVAKDVWDDFALRFAQTNVPKMFNLRKELSSLNQGNLSISA 119
            SW+LN+VSP+I  S++ M  A D+W D   RF  TN+P+ +NL +E+    QG LS+S 
Sbjct: 129 KSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSE 188

Query: 118 YFTKFRTLSDELDVLSDIPR-CDCGK 44
           Y+T+ +TL D+LD    +   C CGK
Sbjct: 189 YYTRLKTLWDQLDSTEALDEPCTCGK 214


>gb|ABW74573.1| putative pol polyprotein [Boechera divaricarpa]
          Length = 937

 Score =  132 bits (333), Expect = 3e-29
 Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 6/163 (3%)
 Frame = -3

Query: 478 HPGTVLITITLIEQNYNQWHRSMKIALSSKLKLGFVDGSCVKPVNSENQLLLWNCCNDIV 299
           HPG  +I+I L   NY+ W+ +M+I+L +K K+GF+DG+  +P+ S+    +W+ CN  V
Sbjct: 59  HPGLQIISIRLDGINYDDWNAAMRISLDAKNKIGFIDGTLPRPLESDMNFRVWSRCNSTV 118

Query: 298 ISWILNTVSPEIKLSVMYMTVAKDVWDDFALRFAQTNVPKMFNLRKELSSLNQGNLSISA 119
            SW+LN+VSP I  S++ +  A D+W D + RF  +N+P++FNL KE+  L QG++S+  
Sbjct: 119 KSWLLNSVSPHIYRSILRLIDAADIWRDLSSRFHMSNLPRIFNLAKEIQDLRQGSMSLLD 178

Query: 118 YFTKFRTLSDELDVLSDIP--RCDCGKCTY----DNNAKLEKF 8
           Y+T  +TL D L+  S+ P   C CG+ T        AK+ KF
Sbjct: 179 YYTTLKTLWDNLE-SSEEPGEPCTCGRATQLQLKAERAKIVKF 220


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  132 bits (331), Expect = 6e-29
 Identities = 61/146 (41%), Positives = 92/146 (63%)
 Frame = -3

Query: 484 ISHPGTVLITITLIEQNYNQWHRSMKIALSSKLKLGFVDGSCVKPVNSENQLLLWNCCND 305
           + HPG VL++  L   NYN W R+M +AL++K K+ F+DGS   P + +     W  CN 
Sbjct: 33  LDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNS 92

Query: 304 IVISWILNTVSPEIKLSVMYMTVAKDVWDDFALRFAQTNVPKMFNLRKELSSLNQGNLSI 125
           +VISWILN+V  +I  S++Y   A  +W+D   RF Q+N P++F ++K L +L+QG+L +
Sbjct: 93  MVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDV 152

Query: 124 SAYFTKFRTLSDELDVLSDIPRCDCG 47
           S Y+T+ + L DEL     +P C CG
Sbjct: 153 STYYTRLKILWDELKGFQPLPECACG 178