BLASTX nr result

ID: Angelica22_contig00027487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027487
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610228.1| RING finger-like protein [Medicago truncatul...    97   3e-18
gb|AFK34620.1| unknown [Medicago truncatula]                           92   8e-17
ref|XP_002325091.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15
ref|XP_002325090.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
gb|AEQ20638.1| RING-H2 zinc finger protein [Manihot esculenta]         80   3e-13

>ref|XP_003610228.1| RING finger-like protein [Medicago truncatula]
           gi|355511283|gb|AES92425.1| RING finger-like protein
           [Medicago truncatula]
          Length = 182

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 54/146 (36%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
 Frame = +1

Query: 91  HRHHAAGDNQKPNPILHSLLIKPIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-- 264
           H HH   +  KPNP L SL +KPII                                R  
Sbjct: 4   HHHHGDPEQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLAGALHRLRFR 63

Query: 265 ----RRTTAASNSITPSEIEENLPGFR--SDPRSDPVKECAVCLEWFKEGENCRKLVDCN 426
               RR  + +++  P EI  NLP FR      S+P   CAVCL+ F+ G+ CR L  C 
Sbjct: 64  PTPTRRLQSLTDAFLPREI-NNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWCRNLAACG 122

Query: 427 HVFHSKCVDSWLVKVLNCPICRGPVK 504
           HVFH +C+D+WL+KV  CP CR PV+
Sbjct: 123 HVFHRRCIDTWLLKVATCPTCRTPVR 148


>gb|AFK34620.1| unknown [Medicago truncatula]
          Length = 182

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 53/146 (36%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
 Frame = +1

Query: 91  HRHHAAGDNQKPNPILHSLLIKPIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-- 264
           H HH   +  KPNP L SL +KPII                                R  
Sbjct: 4   HHHHGDPEQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLAGALHRLRFR 63

Query: 265 ----RRTTAASNSITPSEIEENLPGFR--SDPRSDPVKECAVCLEWFKEGENCRKLVDCN 426
               RR  + +++  P EI  NLP FR      S+P   CAVCL+ F+ G+  R L  C 
Sbjct: 64  PTPTRRLQSLTDAFLPREI-NNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWRRNLAACG 122

Query: 427 HVFHSKCVDSWLVKVLNCPICRGPVK 504
           HVFH +C+D+WL+KV  CP CR PV+
Sbjct: 123 HVFHRRCIDTWLLKVATCPTCRTPVR 148


>ref|XP_002325091.1| predicted protein [Populus trichocarpa] gi|222866525|gb|EEF03656.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 57/155 (36%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
 Frame = +1

Query: 73  PAPTSDHRHHAA--GDNQKPNPILHSLLIKPIIXXXXXXXXXXXXXXXXXXXXXXXXXXX 246
           P P   H HH    G   KPN    SL++K II                           
Sbjct: 2   PPPHHHHDHHRTHGGAPPKPNQEFLSLILKAIIMTAITIFFFLFLGVAAILLLFATSAL- 60

Query: 247 XXXXXRRRTTAASNSITPSEIEE--NLPGFRSDPRSDPV-----KECAVCLEWFKEGENC 405
                 R +T +SNS     ++E   LP FR   ++ P        C VCLE  K+G+ C
Sbjct: 61  -----HRHSTTSSNSPKALPLKELKKLPRFRFSTKTRPETGADQSSCVVCLEEIKQGQWC 115

Query: 406 RKLVDCNHVFHSKCVDSWLVKVLNCPICRGPVKFD 510
           R LV C HVFH KCVD+WLVKV  CPICR  V+ D
Sbjct: 116 RNLVGCGHVFHRKCVDAWLVKVSACPICRTRVELD 150


>ref|XP_002325090.1| predicted protein [Populus trichocarpa] gi|222866524|gb|EEF03655.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
 Frame = +1

Query: 265 RRTTAASNSIT--PSEIEENLPGFRSDPRSDPV-----KECAVCLEWFKEGENCRKLVDC 423
           R +T +SN     P +  + LP FR   ++ P        C VCLE  K+G+ CR LV C
Sbjct: 56  RHSTPSSNPPKGLPLKDLKKLPRFRFSTKTTPETAADQSSCVVCLEDIKQGQWCRNLVGC 115

Query: 424 NHVFHSKCVDSWLVKVLNCPICRGPVKFD 510
            HV H KCVDSWLVKV  CPICR  V+FD
Sbjct: 116 GHVLHMKCVDSWLVKVSACPICRTRVEFD 144


>gb|AEQ20638.1| RING-H2 zinc finger protein [Manihot esculenta]
          Length = 174

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = +1

Query: 313 ENLPGFRSDPRSDPVKE--CAVCLEWFKEGENCRKLVDCNHVFHSKCVDSWLVKVLNCPI 486
           + LP F+   R+ P  E  C VCLE  ++G+ CRKL+ C HVFH KC+D+WL+KV  CP+
Sbjct: 85  KKLPQFKFSRRTKPEDEADCVVCLEGIRQGQWCRKLIACGHVFHRKCIDAWLIKVSACPV 144

Query: 487 CRGPVKFDS 513
           CR  V  DS
Sbjct: 145 CRTRVWLDS 153


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