BLASTX nr result

ID: Angelica22_contig00027485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027485
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-46
ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s...   187   4e-45
ref|XP_003533500.1| PREDICTED: structure-specific endonuclease s...   187   6e-45

>ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1|
            predicted protein [Populus trichocarpa]
          Length = 177

 Score =  191 bits (484), Expect = 4e-46
 Identities = 103/173 (59%), Positives = 113/173 (65%), Gaps = 9/173 (5%)
 Frame = -3

Query: 1157 MVRLVSQTFRSIK---------PHNTVASKSEPAVVXXXXXXXXXXXXXPASWCVYLILS 1005
            M RL+S+TFRS+K         P     S S                    SW VYLILS
Sbjct: 1    MTRLLSKTFRSVKLKASSSKPPPPQQQPSPSSSLPRSRKTRAKSSSNSKSRSWSVYLILS 60

Query: 1004 TNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESK 825
            TN PIKTYVGVT NFSRRLKQHNGELKGGAKASRAGRPW+CAC+I+GF D+S+AC FESK
Sbjct: 61   TNRPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFESK 120

Query: 824  WKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 666
            WKI SRKLPRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121  WKIFSRKLPRKRIDDDQMKQSSKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 173


>ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1|
            predicted protein [Populus trichocarpa]
          Length = 178

 Score =  189 bits (480), Expect = 1e-45
 Identities = 102/174 (58%), Positives = 111/174 (63%), Gaps = 10/174 (5%)
 Frame = -3

Query: 1157 MVRLVSQTFRSIK----------PHNTVASKSEPAVVXXXXXXXXXXXXXPASWCVYLIL 1008
            M RL+SQTFRS+K          P     S S                    SW VYLIL
Sbjct: 1    MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 1007 STNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFES 828
            STN PIKTYVGVT NFSRRLKQHNGELKGGAKASRAGRPW+CAC+I+GF D+S+AC FES
Sbjct: 61   STNHPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFES 120

Query: 827  KWKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 666
            KWK  SRK PRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121  KWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174


>ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1|
            predicted protein [Populus trichocarpa]
          Length = 178

 Score =  187 bits (476), Expect = 3e-45
 Identities = 101/174 (58%), Positives = 111/174 (63%), Gaps = 10/174 (5%)
 Frame = -3

Query: 1157 MVRLVSQTFRSIK----------PHNTVASKSEPAVVXXXXXXXXXXXXXPASWCVYLIL 1008
            M RL+SQTFRS+K          P     S S                    SW VYLIL
Sbjct: 1    MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 1007 STNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFES 828
            STN PIKTYVGVT NFSRRLKQHNG+LKGGAKASRAGRPW+CAC+I+GF D+S+AC FES
Sbjct: 61   STNHPIKTYVGVTTNFSRRLKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSEACKFES 120

Query: 827  KWKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 666
            KWK  SRK PRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121  KWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174


>ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
            vinifera] gi|296085104|emb|CBI28599.3| unnamed protein
            product [Vitis vinifera]
          Length = 160

 Score =  187 bits (475), Expect = 4e-45
 Identities = 106/170 (62%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
 Frame = -3

Query: 1157 MVRLVSQTFRSIK---PH-NTVASKSEPAVVXXXXXXXXXXXXXPASWCVYLILSTNVPI 990
            MVR +S+ FRSIK   P+ N   SKS P+                 SW VYLILSTN PI
Sbjct: 1    MVR-ISKIFRSIKCSNPNPNPDPSKSSPS---------SSRSRSSFSWLVYLILSTNTPI 50

Query: 989  KTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICS 810
            KTYVGVT NFSRRLKQHNGELKGGAKASR GRPWVCAC+IQGF DKS+AC FESKWK  S
Sbjct: 51   KTYVGVTTNFSRRLKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSEACQFESKWKSFS 110

Query: 809  RKLPRKEKLQRQD--QHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 666
            RKLPRK    R D  + ++ND L LL+HR  AL+RVKG + C HLEI W+
Sbjct: 111  RKLPRK----RNDTVRQVDNDSLLLLQHREAALNRVKGSLVCDHLEINWQ 156


>ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like [Glycine
            max]
          Length = 172

 Score =  187 bits (474), Expect = 6e-45
 Identities = 95/167 (56%), Positives = 114/167 (68%), Gaps = 5/167 (2%)
 Frame = -3

Query: 1145 VSQTFRSIKPHNT---VASKSEP--AVVXXXXXXXXXXXXXPASWCVYLILSTNVPIKTY 981
            +S  FRSIK  N+   ++  S P  + +               SW VYLILSTN PIKTY
Sbjct: 4    LSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTY 63

Query: 980  VGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICSRKL 801
            VG+TNNF RRLKQHNGELKGGAKASRAGRPW+CAC+I GF D+S+A  FESKWK  SR+ 
Sbjct: 64   VGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFSRRA 123

Query: 800  PRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWKHD 660
            PRK +     +  E+  LPLLRHR  AL+RVKG +DC+HLEI+W  D
Sbjct: 124  PRKNQNDNLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLD 170


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