BLASTX nr result
ID: Angelica22_contig00027357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00027357
(1537 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 281 e-166
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 192 e-117
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 187 e-116
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 187 e-116
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 187 e-115
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 281 bits (719), Expect(3) = e-166
Identities = 137/165 (83%), Positives = 152/165 (92%)
Frame = +3
Query: 1041 SAESKYDVQKLKGLLSAEFEMKDLGAARKILGMEIYRDRSKRKLFLSQKGYIQKILSRFG 1220
+A+ KYD+QKLKGLLSAEFEMKDLGAARKILGMEI RDR +RKLFLSQ+ YIQK+L+RFG
Sbjct: 996 AAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFG 1055
Query: 1221 MSTPKPIDTLSAANAHLSVTFAPKSVEEKEYMSRVPYASAVGSLMYAMVCTRPDLAQSVR 1400
MS+ KPIDT SAAN HL+ FAP+S EEKEYMSRVPYASAVGSLMYAMVCTRPDLA +V
Sbjct: 1056 MSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVS 1115
Query: 1401 VVSRFMGEPGKEHWQAVKRIFRYLRGTSDVGLIYGGDIECLVTGF 1535
VVSRFMG+PG+EHWQAVKRIFRYLRGTSDVGLIYGGD +CLVTG+
Sbjct: 1116 VVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGY 1160
Score = 229 bits (585), Expect(3) = e-166
Identities = 109/135 (80%), Positives = 122/135 (90%)
Frame = +2
Query: 650 HSERGVDYNEIFSPVVRHTSIRVLLAIVAHQDLELEQLNVKTAFLHGELEEEIYMTQLDG 829
+ GVDYNEIFSPVVRHTSIRVLLAIVAHQ+LELEQL+VKTAFLHGELEEEIYMTQ DG
Sbjct: 865 NQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDG 924
Query: 830 FQVPGKEDYVCKLLKALYGLKQSPRQWYKRFDSYMIGIGYTRSPYDCCVYYSKATNGSLI 1009
FQVPGKE++VCKL K+LYGLKQSPRQWYKRFDSYM+ +GYTRS YDCCVYY++ + S I
Sbjct: 925 FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFI 984
Query: 1010 YLVLYVDDMLICREQ 1054
YLVLYVDDMLI ++
Sbjct: 985 YLVLYVDDMLIAAKK 999
Score = 125 bits (314), Expect(3) = e-166
Identities = 60/91 (65%), Positives = 74/91 (81%)
Frame = +3
Query: 390 LQVAE*VVPNSDEPSTYKEAVTCTESTQWLAAMGEEMESLHKNQTWELVKRP*DRKIVTC 569
LQVAE V ++ EPSTYKEA+ ++S +W AAMG+EMESLHKNQTW+LV +P RKI+TC
Sbjct: 780 LQVAEEV--DTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITC 837
Query: 570 KWVYKKKEGETSVEGIKYKARVVTTGFTQKE 662
KWV+KKKEG + EG+KYKARVV GF Q+E
Sbjct: 838 KWVFKKKEGISPAEGVKYKARVVARGFNQRE 868
Score = 137 bits (344), Expect = 1e-29
Identities = 73/107 (68%), Positives = 77/107 (71%)
Frame = +3
Query: 57 INVKVDKFIGRNSFSLWQIKMRALLKQQGLWASLKKKSTTDPESVEMASLEEKAHSTIML 236
+NVK+DKF GRNSFSLWQIKMRALLKQQG WA L K + EMA LEEKAHSTIML
Sbjct: 4 LNVKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNA-VVTPEMAILEEKAHSTIML 62
Query: 237 CLXXXXXXXXXXXXXXXGLWLKLEGLYMTKSLTNKLLVKQRLFSLRM 377
CL GLWLKLE LYMTKSLTNKLL+KQRLF LRM
Sbjct: 63 CLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRM 109
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 192 bits (487), Expect(3) = e-117
Identities = 99/162 (61%), Positives = 122/162 (75%)
Frame = +3
Query: 1041 SAESKYDVQKLKGLLSAEFEMKDLGAARKILGMEIYRDRSKRKLFLSQKGYIQKILSRFG 1220
+A+ K ++ KLK LS+EFEMKDLGAA+KILGMEI R R KL+LSQKGYI+K+L RF
Sbjct: 1227 AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFN 1286
Query: 1221 MSTPKPIDTLSAANAHLSVTFAPKSVEEKEYMSRVPYASAVGSLMYAMVCTRPDLAQSVR 1400
M KP+ T AA+ LS P+S + EYMSRVPY+SAVGSLMYAMVC+RPDL+ ++
Sbjct: 1287 MHDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDLSHALS 1346
Query: 1401 VVSRFMGEPGKEHWQAVKRIFRYLRGTSDVGLIYGGDIECLV 1526
VVSR+M PGKEHW+AV+ IFRYLRGTS L +G + LV
Sbjct: 1347 VVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRDGLV 1388
Score = 182 bits (463), Expect(3) = e-117
Identities = 88/127 (69%), Positives = 106/127 (83%)
Frame = +2
Query: 662 GVDYNEIFSPVVRHTSIRVLLAIVAHQDLELEQLNVKTAFLHGELEEEIYMTQLDGFQVP 841
G+D+N++FSPVV+H+SIR LL+IVA D ELEQ++VKTAFLHGELEE+IYM Q GF VP
Sbjct: 1101 GIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVP 1160
Query: 842 GKEDYVCKLLKALYGLKQSPRQWYKRFDSYMIGIGYTRSPYDCCVYYSKATNGSLIYLVL 1021
GKE+ VC+L K+LYGLKQSPRQWYKRFDS+M+ + RS YD CVY K +GS IYL+L
Sbjct: 1161 GKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLL 1219
Query: 1022 YVDDMLI 1042
YVDDMLI
Sbjct: 1220 YVDDMLI 1226
Score = 97.1 bits (240), Expect(3) = e-117
Identities = 44/89 (49%), Positives = 64/89 (71%)
Frame = +3
Query: 390 LQVAE*VVPNSDEPSTYKEAVTCTESTQWLAAMGEEMESLHKNQTWELVKRP*DRKIVTC 569
L VAE + N+ EPSTY EA+ + +W+ AM +EMESL KN TWELVK P ++K + C
Sbjct: 1011 LSVAEEIEGNA-EPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRC 1069
Query: 570 KWVYKKKEGETSVEGIKYKARVVTTGFTQ 656
KW++K+KEG +S + +YKAR++ G++Q
Sbjct: 1070 KWIFKRKEGISSSDEARYKARLIAKGYSQ 1098
Score = 58.5 bits (140), Expect = 4e-06
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +3
Query: 96 FSLWQIKMRALLKQQGLWASLK--KKSTTDPESVEMASLEEKAHSTIMLCLXXXXXXXXX 269
FSLWQ+KMRA+L QQ L +L K T D + E + KA S I L L
Sbjct: 224 FSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKR-DRKAMSYIHLHLSNNILQEVL 282
Query: 270 XXXXXXGLWLKLEGLYMTKSLTNKLLVKQRLF 365
GLWLKLE + MTK LT+K+ +KQ LF
Sbjct: 283 KEEIAAGLWLKLEQICMTKDLTSKMHLKQTLF 314
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 187 bits (475), Expect(3) = e-116
Identities = 92/127 (72%), Positives = 106/127 (83%)
Frame = +2
Query: 662 GVDYNEIFSPVVRHTSIRVLLAIVAHQDLELEQLNVKTAFLHGELEEEIYMTQLDGFQVP 841
GVDYN++FSPVV+H+SIR L+IVA DLELEQL+VKTAFLHGELEE+IYM Q +GF VP
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 842 GKEDYVCKLLKALYGLKQSPRQWYKRFDSYMIGIGYTRSPYDCCVYYSKATNGSLIYLVL 1021
GKE YVCKL ++LYGLKQSPRQW KRFDS+M+ + RS YD CVY K NGS IYL+L
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLL 1013
Query: 1022 YVDDMLI 1042
YVDDMLI
Sbjct: 1014 YVDDMLI 1020
Score = 179 bits (454), Expect(3) = e-116
Identities = 92/155 (59%), Positives = 115/155 (74%)
Frame = +3
Query: 1041 SAESKYDVQKLKGLLSAEFEMKDLGAARKILGMEIYRDRSKRKLFLSQKGYIQKILSRFG 1220
+A+SK ++ KLK LLS+EF+MKDLG+A+KILGMEI RDR LFLSQ YI+K+L RF
Sbjct: 1021 AAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFN 1080
Query: 1221 MSTPKPIDTLSAANAHLSVTFAPKSVEEKEYMSRVPYASAVGSLMYAMVCTRPDLAQSVR 1400
M K + T A + LS P E EYMSRVPY+SAVGSLMYAMVC+RPDL+ ++
Sbjct: 1081 MQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMS 1140
Query: 1401 VVSRFMGEPGKEHWQAVKRIFRYLRGTSDVGLIYG 1505
+VSR+M PGKEHW+AV+ IFRYLRGT+ L +G
Sbjct: 1141 LVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFG 1175
Score = 103 bits (256), Expect(3) = e-116
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = +3
Query: 351 KQRLFSLRMHYRLLQVAE*VVPNSDEPSTYKEAVTCTESTQWLAAMGEEMESLHKNQTWE 530
K+ + + Y L AE V N EP+TYKEAV C +S W++AM EEM+SL KN TWE
Sbjct: 792 KRLIEECNLSYYALSCAE-QVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWE 850
Query: 531 LVKRP*DRKIVTCKWVYKKKEGETSVEGIKYKARVVTTGFTQ 656
+V P +K ++CKW++K+KEG +S E KYKAR+V G++Q
Sbjct: 851 VVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQ 892
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 187 bits (475), Expect(3) = e-116
Identities = 92/127 (72%), Positives = 106/127 (83%)
Frame = +2
Query: 662 GVDYNEIFSPVVRHTSIRVLLAIVAHQDLELEQLNVKTAFLHGELEEEIYMTQLDGFQVP 841
GVDYN++FSPVV+H+SIR L+IVA DLELEQL+VKTAFLHGELEE+IYM Q +GF VP
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 842 GKEDYVCKLLKALYGLKQSPRQWYKRFDSYMIGIGYTRSPYDCCVYYSKATNGSLIYLVL 1021
GKE YVCKL ++LYGLKQSPRQW KRFDS+M+ + RS YD CVY K NGS IYL+L
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLL 1013
Query: 1022 YVDDMLI 1042
YVDDMLI
Sbjct: 1014 YVDDMLI 1020
Score = 179 bits (454), Expect(3) = e-116
Identities = 92/155 (59%), Positives = 115/155 (74%)
Frame = +3
Query: 1041 SAESKYDVQKLKGLLSAEFEMKDLGAARKILGMEIYRDRSKRKLFLSQKGYIQKILSRFG 1220
+A+SK ++ KLK LLS+EF+MKDLG+A+KILGMEI RDR LFLSQ YI+K+L RF
Sbjct: 1021 AAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFN 1080
Query: 1221 MSTPKPIDTLSAANAHLSVTFAPKSVEEKEYMSRVPYASAVGSLMYAMVCTRPDLAQSVR 1400
M K + T A + LS P E EYMSRVPY+SAVGSLMYAMVC+RPDL+ ++
Sbjct: 1081 MQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMS 1140
Query: 1401 VVSRFMGEPGKEHWQAVKRIFRYLRGTSDVGLIYG 1505
+VSR+M PGKEHW+AV+ IFRYLRGT+ L +G
Sbjct: 1141 LVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFG 1175
Score = 103 bits (256), Expect(3) = e-116
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = +3
Query: 351 KQRLFSLRMHYRLLQVAE*VVPNSDEPSTYKEAVTCTESTQWLAAMGEEMESLHKNQTWE 530
K+ + + Y L AE V N EP+TYKEAV C +S W++AM EEM+SL KN TWE
Sbjct: 792 KRLIEECNLSYYALSCAE-QVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWE 850
Query: 531 LVKRP*DRKIVTCKWVYKKKEGETSVEGIKYKARVVTTGFTQ 656
+V P +K ++CKW++K+KEG +S E KYKAR+V G++Q
Sbjct: 851 VVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQ 892
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 187 bits (475), Expect(3) = e-115
Identities = 92/127 (72%), Positives = 106/127 (83%)
Frame = +2
Query: 662 GVDYNEIFSPVVRHTSIRVLLAIVAHQDLELEQLNVKTAFLHGELEEEIYMTQLDGFQVP 841
GVDYN++FSPVV+H+SIR L+IVA DLELEQL+VKTAFLHGELEE+IYM Q +GF VP
Sbjct: 895 GVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVP 954
Query: 842 GKEDYVCKLLKALYGLKQSPRQWYKRFDSYMIGIGYTRSPYDCCVYYSKATNGSLIYLVL 1021
GKE YVCKL ++LYGLKQSPRQW KRFDS+M+ + RS YD CVY K NGS IYL+L
Sbjct: 955 GKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLL 1013
Query: 1022 YVDDMLI 1042
YVDDMLI
Sbjct: 1014 YVDDMLI 1020
Score = 175 bits (444), Expect(3) = e-115
Identities = 90/155 (58%), Positives = 114/155 (73%)
Frame = +3
Query: 1041 SAESKYDVQKLKGLLSAEFEMKDLGAARKILGMEIYRDRSKRKLFLSQKGYIQKILSRFG 1220
+A+SK ++ KLK LLS+EF+MKDLG+A+KIL MEI RDR LFLSQ YI+K+L RF
Sbjct: 1021 AAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFN 1080
Query: 1221 MSTPKPIDTLSAANAHLSVTFAPKSVEEKEYMSRVPYASAVGSLMYAMVCTRPDLAQSVR 1400
M K + T A + LS P + E EYMSRVPY+SAVGSLMYAMVC+RPDL+ ++
Sbjct: 1081 MQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMS 1140
Query: 1401 VVSRFMGEPGKEHWQAVKRIFRYLRGTSDVGLIYG 1505
+VSR+M PGKEHW+ V+ IFRYLRGT+ L +G
Sbjct: 1141 LVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFG 1175
Score = 103 bits (256), Expect(3) = e-115
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = +3
Query: 351 KQRLFSLRMHYRLLQVAE*VVPNSDEPSTYKEAVTCTESTQWLAAMGEEMESLHKNQTWE 530
K+ + + Y L AE V N EP+TYKEAV C +S W++AM EEM+SL KN TWE
Sbjct: 792 KRLIEECNLSYYALSCAE-QVENVHEPATYKEAVRCGDSENWISAMHEEMQSLEKNSTWE 850
Query: 531 LVKRP*DRKIVTCKWVYKKKEGETSVEGIKYKARVVTTGFTQ 656
+V P +K ++CKW++K+KEG +S E KYKAR+V G++Q
Sbjct: 851 VVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQ 892