BLASTX nr result

ID: Angelica22_contig00027332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027332
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]           76   3e-12
emb|CBI33172.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...    75   4e-12
ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thali...    72   4e-11
ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like...    72   6e-11

>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = -2

Query: 118 MYLYNLTLQQATGIVCAINGSFTGGKSQEIVVARGKVLD 2
           MYLYNLTLQQATGIVCAING+F+GGKSQEI VARGKVLD
Sbjct: 1   MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLD 39


>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -2

Query: 118 MYLYNLTLQQATGIVCAINGSFTGGKSQEIVVARGKVLD 2
           MYLY+LTLQQATGIVCAING+F+GGKSQEIVVARGKVLD
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLD 39


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -2

Query: 118 MYLYNLTLQQATGIVCAINGSFTGGKSQEIVVARGKVLD 2
           MYLY+LTLQQATGIVCAING+F+GGKSQEIVVARGKVLD
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLD 39


>ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|18410226|ref|NP_567016.1| putative splicing factor
           [Arabidopsis thaliana] gi|7019653|emb|CAB75754.1|
           spliceosomal-like protein [Arabidopsis thaliana]
           gi|7019655|emb|CAB75756.1| spliceosomal-like protein
           [Arabidopsis thaliana] gi|332645831|gb|AEE79352.1|
           splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|332645833|gb|AEE79354.1| putative splicing factor
           [Arabidopsis thaliana]
          Length = 1214

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = -2

Query: 118 MYLYNLTLQQATGIVCAINGSFTGGKSQEIVVARGKVLD 2
           MYLY+LTLQQATGIVCAING+F+GGK+QEI VARGK+LD
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILD 39


>ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = -2

Query: 118 MYLYNLTLQQATGIVCAINGSFTGGKSQEIVVARGKVLD 2
           MYLY+LTLQ+ TGI+CAING+F+GGKSQEIVVARGKVLD
Sbjct: 1   MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLD 39


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