BLASTX nr result

ID: Angelica22_contig00027279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027279
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGF33077.1| chromosome 5 cycling DOF factor-like protein [Sol...    62   4e-08
ref|XP_003528583.1| PREDICTED: dof zinc finger protein DOF5.2-li...    58   9e-07
ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_003556733.1| PREDICTED: dof zinc finger protein DOF5.2-li...    56   3e-06

>gb|AGF33077.1| chromosome 5 cycling DOF factor-like protein [Solanum tuberosum]
          Length = 394

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
 Frame = -2

Query: 363 MSEVKDPSIKLFGKTIQLLLPEEDDDVSFLNHHKLD---SVQNNPEVVEGEFMNTKEQEE 193
           MSEV+DP+IKLFGKTI  +  +E + V   + H      S+ ++   +EGEF  +K+ +E
Sbjct: 1   MSEVRDPAIKLFGKTIG-MTQQETNCVYLHDDHTTSSPLSIDDDKITLEGEFTQSKQDDE 59

Query: 192 KVELINEDPRTPNVDKETSAEEMKNQTTSSGMSDDSKTPNVDKESSSLETGEKED 28
            V+        P  D     E      TSSG+SDD K  + DKE+ S ++ E+ED
Sbjct: 60  LVD--------PTADSSIEPE------TSSGISDDIKMQDADKETLSSKSIEEED 100


>ref|XP_003528583.1| PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max]
          Length = 479

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = -2

Query: 363 MSEVKDPSIKLFGKTIQLLLPEEDDDVSFLNHHKLDSVQNNPEVVEGEFMNTKEQEEKVE 184
           MSEVKDP+IKLFG+TI L     +D  S     +  S  ++P  V      T++Q E  E
Sbjct: 1   MSEVKDPAIKLFGRTISLTHTHINDSSSSSAPARAPSSSSSPREVTSS--ATQQQHEPEE 58

Query: 183 LINEDPRTPNVD--KETSAEEMKNQTTSSGMSDDSKTPNVDKESSSLETGEKEDPVDLNN 10
              ++  +   D     + E++K+ TTSSG+ ++ KTP+ + E+S  ++    +  + + 
Sbjct: 59  PSRKELTSSQDDDGSHQTTEDLKSPTTSSGIFENPKTPSPETETSVPKSSTNGEQSETSA 118

Query: 9   SD 4
           SD
Sbjct: 119 SD 120


>ref|XP_002306032.1| predicted protein [Populus trichocarpa] gi|222848996|gb|EEE86543.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
 Frame = -2

Query: 363 MSEVKDPSIKLFGKTIQLLL-----------PEEDDDVSFLNHHKLDSVQNNPEVVEGEF 217
           M E KDP+IKLFGKTIQ+              ++ D  S  +    D+  +N +   GE 
Sbjct: 1   MLEPKDPAIKLFGKTIQVTEISSTTTTDNDDSQDQDRPSCASSSLYDADSDNNKRYHGEE 60

Query: 216 MNTKEQEEKVELINEDPRTPNVDKETSAEEMKNQTTSSGMSDDSKTPNVDKESSSLETGE 37
               + ++ VE    + +   V    + EE  N   +SG S++ KTP+++KES  L+T  
Sbjct: 61  DIEADDKDSVEKSLTEKQEDGVSP-VATEEPSNPDATSGTSENPKTPSIEKESEGLQTSR 119

Query: 36  -KEDPVDLNNS 7
            +E+  D +NS
Sbjct: 120 TEEEDSDTSNS 130


>ref|XP_003556733.1| PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max]
          Length = 482

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
 Frame = -2

Query: 363 MSEVKDPSIKLFGKTIQLLLPEEDDDVSFLNHHK---LDSVQNNP-EVVEGEFMNTKEQE 196
           MSEVKDP+IKLFG+TI L     +D  S  +        S  ++P EV         E E
Sbjct: 1   MSEVKDPAIKLFGRTISLPHTHINDSFSSASASGPACAPSSSSSPREVTSSATQQQHEPE 60

Query: 195 EKVELINEDPRTPNVDKETSAEEMKNQTTSSGMSDDSKTPNVDKESS---SLETGEKED 28
           E    +    +  +     + E++K+ TTSSG+ ++ KTP+ + E+S   S   GEK +
Sbjct: 61  EPSRKVLTSSQDDDDASHQTTEDLKSSTTSSGIFENPKTPSAETETSIPKSSTNGEKSE 119


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