BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00027242
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   317   5e-84
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   315   1e-83
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   275   2e-71
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   267   3e-69
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin...   267   4e-69

>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  317 bits (811), Expect = 5e-84
 Identities = 147/192 (76%), Positives = 169/192 (88%)
 Frame = -2

Query: 952 MFYLSEIEHTMRVPPHLLNLPLNDAIQGELERLFLDKVVANLGLVISVYDINSINGGFVF 773
           MFYLS IEHT+R+PPHLL+LPLN+AI+GELE LFLDKV+ANLGL ISVYDI SI+GGFVF
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 772 PSDGASTYTVKFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPVHLMPNPSHF 593
           P DGASTYTV+FRLV+FRPFVGE++TAKL ES ANGLRLSLGFFDDIY+PVHLMPNP H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 592 EADPVNKNQVAWIWEYQDENYAIDGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITGS 413
           E +P  K QV WIW+YQ++ + IDG+DEIRF+V ++SYPPIP+E  KES  FAPMVI GS
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGS 180

Query: 412 LDADGLGPVSWW 377
           LD DGLGPVSWW
Sbjct: 181 LDYDGLGPVSWW 192


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  315 bits (808), Expect = 1e-83
 Identities = 146/192 (76%), Positives = 171/192 (89%)
 Frame = -2

Query: 952 MFYLSEIEHTMRVPPHLLNLPLNDAIQGELERLFLDKVVANLGLVISVYDINSINGGFVF 773
           MF+LS IEHT+R+PPHLL+LPLN+AI+GELE LFLDKV+ANLGL ISVYDI SI+GGFVF
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 772 PSDGASTYTVKFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPVHLMPNPSHF 593
           P DGASTYTV+FRLV+FRPFVGE++TAKL ES ANGL+LSLGFFDDIY+PVHLMPNP H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 592 EADPVNKNQVAWIWEYQDENYAIDGVDEIRFRVNNISYPPIPIEADKESNRFAPMVITGS 413
           E DP NK+QV WIW+YQ++ + IDG+DEIRF+V ++SYPPIP+E  KES  FAPM+I GS
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGS 180

Query: 412 LDADGLGPVSWW 377
           LD DGLGPVSWW
Sbjct: 181 LDYDGLGPVSWW 192


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  275 bits (702), Expect = 2e-71
 Identities = 127/196 (64%), Positives = 161/196 (82%), Gaps = 4/196 (2%)
 Frame = -2

Query: 952 MFYLSEIEHTMRVPPHLLNLPLNDAIQGELERLFLDKVVANLGLVISVYDINSINGGFVF 773
           MFYLSEIEHT+R+PP LL+LPL DA++ ELE +FLDKV+ANLGL ISVYD+  I+GGF+F
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 772 PSDGASTYTVKFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPVHLMPNPSHF 593
           P DGASTYTV+FR+VVFRPFVGE++ AKL ES  +GLRLSLGFFDDIY+P H +P PS+ 
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 592 EADPVNKNQVAWIWEYQDEN----YAIDGVDEIRFRVNNISYPPIPIEADKESNRFAPMV 425
           + DP N+ Q  WIWE+  E+    + IDG+DEI+FRV+++ YPP+P+E  ++   FAPMV
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLE--QQEKPFAPMV 178

Query: 424 ITGSLDADGLGPVSWW 377
           ITGS+D +GLGPVSWW
Sbjct: 179 ITGSIDDEGLGPVSWW 194


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  267 bits (683), Expect = 3e-69
 Identities = 124/194 (63%), Positives = 155/194 (79%), Gaps = 2/194 (1%)
 Frame = -2

Query: 952 MFYLSEIEHTMRVPPHLLNLPLNDAIQGELERLFLDKVVANLGLVISVYDINSINGGFVF 773
           MFYLSE+EH++RVPPHLLNLPL DAI+  L+ +FLDKV+A+LGL +SVYDI SI GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 772 PSDGASTYTVKFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPVHLMPNPSHF 593
           P DGA+TY V FR+VVFRPFVGEV+ AK  ES +NGLRL+LGFFDDIYVP  LMP P+  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 592 EADPVNKNQVAWIWEYQD--ENYAIDGVDEIRFRVNNISYPPIPIEADKESNRFAPMVIT 419
           E DP N+ Q+ W+WEY +  E++ ID   +I+FRV +ISYP +P E  +++  FAPMV+T
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180

Query: 418 GSLDADGLGPVSWW 377
           G++D DGLGPVSWW
Sbjct: 181 GNMDEDGLGPVSWW 194


>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|17529108|gb|AAL38764.1| putative RNA polymerase
           [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
           putative RNA polymerase [Arabidopsis thaliana]
           gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  267 bits (682), Expect = 4e-69
 Identities = 122/194 (62%), Positives = 154/194 (79%), Gaps = 2/194 (1%)
 Frame = -2

Query: 952 MFYLSEIEHTMRVPPHLLNLPLNDAIQGELERLFLDKVVANLGLVISVYDINSINGGFVF 773
           MFYLSE+EH++RVPPHLLNLPL DAI+  L+ +FLDKV+A+LGL +S+YDI S+ GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 772 PSDGASTYTVKFRLVVFRPFVGEVVTAKLLESTANGLRLSLGFFDDIYVPVHLMPNPSHF 593
           P DGA+TY V  R+VVFRPFVGEV+ AK  ES ANGLRL+LGFFDDIYVP  LMP P+  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 592 EADPVNKNQVAWIWEYQD--ENYAIDGVDEIRFRVNNISYPPIPIEADKESNRFAPMVIT 419
           E DP N+ Q+ W+WEY +  E+Y +D   +I+FRV +ISYP +P E  +++  FAPMV+T
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180

Query: 418 GSLDADGLGPVSWW 377
           G++D DGLGPVSWW
Sbjct: 181 GNMDDDGLGPVSWW 194